平成30年度発足 新学術領域研究
発動分子科学

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研究成果 - B01-2

【原著論文】      【書籍/総説・解説】

原著論文
Reversible Photocontrol of Microtubule Stability by Spiropyran-Conjugated Tau-Derived Peptides
H. Inaba, M. Sakaguchi, S. Watari, S. Ogawa, A. M. Rashedul Kabir, A. Kakugo, K. Sada, K. Matsuura, ChemBioChem, 24, e202200782 (2023), DOI: 10.1002/cbic.202200782

3D structure of ring-shaped microtubule swarms revealed by high-speed atomic force microscopy
M. Rubaya Rashid, C. Ganser, M. Akter, S. Nasrin, A. Kabir, K. Sada, T. Uchihashi, *A. Kakugo, Chem. Lett , 52,100-104 (2023), DOI: 10.1246/cl.220491

Collision-induced torque mediates the transition of chiral dynamic patterns formed by active particles
M. *T. Hiraiwa, R. Akiyama, D. Inoue, A. M. R. Kabir, A. Kakugo, Phys. Chem. Chem. Phys. , 24, 28782-28787 (2022), DOI: 10.1039/D2CP03879J

Generation of stable microtubule superstructures by binding of peptide-fused tetrameric proteins to inside and outside
*H. Inaba, Y. Sueki, M. Ichikawa, A. M. R. Kabir, T. Iwasaki, H. Shigematsu, A. Kakugo, K. Sada, T. Tsukazaki, K. Matsuura, Sci. Adv. , 8, eabq3817 (2022), DOI: 10.1126/sciadv.abq3817

Kinesin motors driven microtubule swarming triggered by UV light
S. Ishii, M. Akter, K. Murayama, A. M. R. Kabir, H. Asanuma , K. Sada, *A. Kakugo, Polym J , 54, 1501-1507 (2022), DOI: 10.1038/s41428-022-00693-1

Light-induced stabilization of microtubules by photo-crosslinking of Tau-derived peptide
S. Watari, * H. Inaba, T. Tamura, A. M. R. Kabir, A. Kakugo, K. Sada, I. Hamachi, * K. Matsuura, Chem. Commun. , 58, 9190-9193 (2022), DOI: 10.1039/D2CC01890J

Site-selective spin-probe with a photocleavable macrocyclic linker for measuring the dynamics of water surrounding a liposomal assembly
G. Lee, *Y. Kageyama, S. Takeda, Bull. Chem. Soc. Jpn. , 95, 909-921 (2022), D DOI: 10.1246/bcsj.20220027

Cooperative cargo transportation by a swarm of molecular machines
M. Akter, J. Jannat Keya, K. Kayano, A. M. R. Kabir, D. Inoue, K. Sada, A. Kuzuya, H. Asanuma, * A. Kakugo, Science Robot. , 7, eabm0677(2022), DOI: 10.1126/scirobotics.abm0677

Fluctuation in the sliding movement of kinesin-driven microtubules is regulated using the deep-sea osmolyte trimethylamine N-oxide
A.M. R. Kabir, T. Munmun, K. Sada, * A. Kakugo, ACS Omega, 7, 18597–18604 (2022), DOI: 10.1021/acsomega.2c01228

Self-Propulsion of a Light-Powered Microscopic Crystalline Flapper in Water
K. Obara, *Y. Kageyama, S. Takeda, Small , 18, 2105302 (2022), DOI: 10.1002/smll.202105302

Structural Changes of Microtubules by Encapsulation of Gold Nanoparticles Using a Tau-Derived Peptide
H. Inaba, A. M. R. Kabir, A. Kakugo, K. Sada, *K. Matsuura, Chem.Lett. , 51, 348-351 (2022), DOI: 10.1246/cl.210761

Unexpected Dissociation of Photoresponsive UV-ON DNA Carrying p-tert-Butyl Azobenzene under UV Light Irradiation
S. Ishii, K. Murayama, K. Sada, *H. Asanmuma, *A. Kakugo, Chem.Lett. , 51, 292-295 (2022), DOI: 10.1246/cl.210788

Controlling the rigidity of kinesin-propelled microtubules in an in vitro gliding assay using the deep-sea osmolyte trimethylamine N-oxide
A. M. R. Kabir, T. Munmun, T. Hayashi, S. Yasuda; A. P. Kimura, M. Kinoshita, T. Murata, K. Sada, * A. Kakugo, ACS Omega , 7, 3796-3803 (2022), DOI: 10.1021/acsomega.1c06699

1,2-Disubstituted-1,2-dihydro-1,2,4,5-tetrazine-3,6-dione as a Dynamic Covalent Bonding Unit at Room Temperature
K. Kawai; K. Ikeda; A. Sato; A. Kabasawa; M. Kojima; K. Kokado, A. Kakugo, K. Sada, T. Yoshino; *S. Matsunaga, J. Am. Chem. Soc. , 144, 1370-1379 (2022), DOI: 10.1021/jacs.1c11665

Deformation of microtubules regulates translocation dynamics of kinesin
S. Araki, K. Beppu, A. M. R. Kabir, *A. Kakugo, *Y. T. Maeda, Nano Letters , 21, 10478-10485 (2021), DOI: 10.1021/acs.nanolett.1c03952

Deformation of microtubules regulates translocation dynamics of kinesin
S. Rubaiya Nasrin, C. Ganser, S. Nishikawa, A. M. R. Kabir, K. Sada, T. Yamashita, M. Ikeguchi, T. Uchihashi, H. Hess, *A. Kakugo, Science Advances , 7, eabf2211 (2021), DOI: 10.1126/sciadv.abf2211

Monopolar flocking of microtubules in collective motion
F. Afroze, D. Inoue, T. Farhana, T. Hiraiwa, R. Akiyama, A. M. R. Kabir, K. Sada, *A. Kakugo, BBRC , 563, 73-78 (2021), DOI: 10.1016/j.bbrc.2021.05.037

Controlling the length of self-assembled microtubes through mechanical stress-induced scission
A. M. R. Kabir, K. Sada, *A. Kakugo, Chem. Commun. , 57, 468-471 (2021), DOI: 10.1039/D0CC07327J

Modeling a microtubule filaments mesh structure from confocal microscopy imaging
*Y. Ueno, K. Matsuda, K. Kato, A. Kuzuya, A. Kakugo, A. Konagaya, Micromachines , 11, 844 (2020), DOI: 10.3390/mi11090844

Tensegrity representation presenting the mechanical properties of microtubule objects in a haptic virtual reality environment using unified particle objects model of and springs and anchors
A. Pramudwiatmoko, G. Gutmann, Y. Ueno, A. Kakugo, M. Yamamura, *A. Konagaya, Chem. Bio. Informat. J. , 20, 19-43 (2020), DOI: 10.1273/cbij.20.19

Magnetic Force-Induced Alignment of Microtubules by Encapsulation of CoPt Nanoparticles Using a Tau-Derived Peptide
H. Inaba, M. Yamada, M. R. Rashid, A. M. R. Kabir, *A. Kakugo, K. Sada, K. Matsuura, Nano Lett. , 5251-5258 (2020), DOI: 0.1021/acs.nanolett.0c01573

Photo-regulated trajectories of gliding microtubules conjugated with DNA
M. Akter, J. J. Keya, A. M. R. Kabir, H. Asanuma, K. Murayama, K. Sada, *A. Kakugo, Chem. Commun. , 56, 7953-7956 (2020), DOI: 10.1039/D0CC03124K

Mechanical Stimulation-Induced Unidirectional Organization of Gliding Microtubules in Confined Microwells
D. Inoue, A. M. R. Kabir, K. Tokuraku, K. Sada, *A. Kakugo, Adv. Mater. Interfaces , 7, (2020), DOI: 10.1002/admi.201902013

Radial Alignment of Microtubules through Tubulin Polymerization in an Evaporating Droplet
J. J. Keya, H. Kudoh, A. M. R. Kabir, D. Inoue, N. Miyamoto, T. Tani, *A. Kakugo, K. Shikinaka, Plos One , 15, e0231352 (2020)

Comparison of the microtubules stabilized with anti-cancer drugs cevipabulin and paclitaxel
S. R. Nasrin, T. Ishihara, A. M. R. Kabir, A. Konagaya, K. Sada, *A. Kakugo, Polym. J. , 52, 969-976 (2020), DOI: 10.1038/s41428-020-0334-9

Light‐driven flipping of azobenzene assemblies ― sparse crystal structures and responsive behavior to polarized light
*Y. Kageyama, T. Ikegami, S. Satonaga, K. Obara, H. Sato, *S. Takeda, Chem. Eur.J. , 26, 10759-10768 (2020), DOI: 10.1002/chem.202000701

Regulation of biomolecular motor-driven cargo transport by microtubules under mechanical stress
S. R. Nasrin, T. Afrin, A. M. R. Kabir, D. Inoue, T. Torisawa, K. Oiwa, K. Sada, *A. Kakugo, ACS Appl. Bio Mater. , 3, 1875-1883 (2020), DOI: 10.1021/acsabm.9b01010

Effect of Microtubule Immobilization by Glutaraldehyde on Kinesin-Driven Cargo Transport
S. R. Nasrin, A. M. R. Kabir, K. Sada, *A. Kakugo, Polym. J. ,52, 655-660 (2020),DOI: 10.1038/s41428-020-0309-x

Breaking of buckled microtubules is mediated by kinesins
A. M. R. Kabir, K. Sada, *A. Kakugo, Biochem. Biophys. Res. Commun., 524, 249-254 (2020), DOI: 10.1016/j.bbrc.2020.01.082

Controlling the kinetics of interaction between microtubules and kinesins over a wide temperature range using a deep-sea osmolyte trimethylamine N-oxide
T. Munmun, A. M. R. Kabir, Y. Katsumoto, K. Sada, *A. Kakugo,Chem. Commun., 56,1187-1190 (2020), DOI: 10.1039/c9cc09324a

Complete, rapid and reversible regulation of the motility of a nano-biomolecular machine using an osmolyte trimethylamine-N-oxide
T. Munmun, A. M. R. Kabir, K. Sada, *A. Kakugo, Sens. Actuators: B , 304, 127231 (2020), DOI: 10.1016/j.snb.2019.127231

Adaptation of Patterns of Motile Filaments under Dynamic Boundary Conditions
D. Inoue, G. Gutmann, T. Nitta, A. M. R. Kabir, A. Konagaya, K. Tokuraku, K. Sada, H. Hess, *A. Kakugo, ACS Nano , 13, 12452-12460 (2019), DOI: 10.1021/acsnano.9b01450

_・Fluorescent Tau-derived Peptide for Monitoring Microtubules in Living Cells
*H. Inaba, T. Yamamoto, T. Iwasaki, A. M. R. Kabir, A. Kakugo, K. Sada, *K. Matsuura, ACS Omega , 4, 11245-11250 (2019), DOI: 10.1021/acsomega.9b01089

Stabilization of Microtubules by Encapsulation of GFP Using Tau-Derived Peptide
*H. Inaba, T. Yamamoto, T. Iwasaki, A. M. R. Kabir,A. Kakugo, K. Sada, *K. Matsuura, Chem. Commun., 55, 9072-9075 (2019), DOI: 10.1039/C9CC04345D

Stabilization of microtubules by cevipabulin
S. R. Nasrina A. M. R. Kabir, A. Konagaya, T. Ishihara, K. Sada, *A. Kakugo,
Biochem. Biophys. Res. Commun , 516, 760-764 (2019), DOI: 10.1016/j.bbrc.2019.06.095

Artificial Smooth Muscle Model Composed of Hierarchically Ordered Microtubule Asters Mediated by DNA Origami Nanostructures
K. Matsuda, A. M. R. Kabir, N. Akamatsu, Ai Saito, S. Ishikawa, T. Matsuyama, O. Ditzer, M. S. Islam, Y. Ohya, K. Sada, A. Konagaya, *A. Kuzuya, *A. Kakugo, Nano Lett. , 19, 3933-3938 (2019), DOI: 10.1021/acs.nanolett.9b01201

Substrate selectivity and its mechanistic insight of the photo-responsive non-nucleoside triphosphate for myosin and kinesin
M. J. Islam, K. Matsuo, H. M. Menezes, M. Takahashi, H. Nakagawa, A. Kakugo, K. Sad, *N. Tamaoki, Org. Biomol. Chem.17, 53-65 (2019), DOI: 10.1039/C8OB02714E

Liquid Crystalline Colloidal Mixture of Nanosheets and Rods with Dynamically Variable Length
R. Kato, *A. Kakugo, K, Shikinaka, Y. Ohsedo, A. M. R. Kabir, *N. Miyamoto, ACS Omega., 3, 14869–14874 (2018), DOI: 10.1021/acsomega.8b01050

Molecular Encapsulation Inside Microtubules Based on Tau-Derived Peptides
*H. Inaba, T. Yamamoto, A. M. R. Kabir, A. Kakugo, K. Sada , *K. Matsuura, Chem. Eur. J., 56, 14958-14967 (2018), DOI: 10.1002/chem.201802617

Control of swarming of molecular robots
J. J. Keya, A. M. R. Kabir, D. Inoue, K. Sada, H. Hess, A. Kuzuya, *A. Kakugo, Sci. Rep., 8, 11756 (2018), DOI: 10.1038/s41598-018-30187-1

書籍/総説・解説
・“偏光で振付けを変えて踊る分子ロボットを実現”, *景山 義之, Isotope News , 775, 31-35(2021)

Robust Dynamics of Synthetic Molecular Systems as A Consequence of Broken Symmetry
*Yoshiyuki Kageyama, Symmetry , 12, 1688 (2020), DOI: 10.3390/sym12101688

・"群れる発動分子システム -群れることで機能を創発する分子システムの構築-”, 角五彰, 化学と工業 , 73, 460-462 (2020)

Molecular swarm robots: recent progress and future challenges
A. M. R. Kabir, D. Inoue, *A. Kakugo, Science and Technology of Advanced Materials, 21, 323-332 (2020), DOI: 10.1080/14686996.2020.1761761

・“Synchronous operation of biomolecular engines”, J. J. Keya, A. M. R. Kabir, *A. Kakugo, Biophys Rev. , 12, 401-409 (2020), DOI: 10.1007/s12551-020-00651-2

・“生体分子モーターと DNA オリガミによる 分子人工筋肉の開発”, 松田健人・アリフ ムハンマド ラセドゥル コビル・ 佐田和己・葛谷明紀・角五彰, 月刊BIOINDUSTRY , シーエムシー出版(2020)

・“微小管の機械的刺激への応答と適応”, 井上大介・角五彰, 月刊「アグリバイオ」, 3, 90-94(2019)

・“DNA オリガミ構造体による 分子人工筋肉の開発とその展望”, 松田健人・アリフ ムハンマド ラセドゥル コビル・佐田和己・葛谷明紀・角五彰, 機能材料 , シーエムシー出版(2019)

・“微小管は機械的刺激をセンシングする動的プローブである”, 井上大介・角五彰, 月刊「細胞」, 51, 35-37 (2019)

Light-Powered Self-Sustainable Macroscopic Motion for the Active Locomotion of Materials
Yoshiyuki Kageyama*, ChemPhotoChem , 3, 327-336 (2019), DOI: 10.1002/cptc.201900013

・“光を浴びて舞い踊る結晶”
小原一馬・景山義之, 化学と教育, 67, 74-75 (2019)

・「Methods in Molecular Biology, Microtubules-Methods and Protocols.」,H. Inaba (Eds),
“Functionalization of tubulin: approaches to modify tubulin with biotin and DNA”,M. Akter, J. J. Keya, A. M. R Kabir, M.R. Rashid, S. Ishii, A. Kakugo, 47-59,Springer Nature,(2022), ISBN: 978-1-0716-1983-4

・「Methods in Molecular Biology, Microtubules-Methods and Protocols.」,H. Inaba (Eds),
“Construction of molecular robots from microtubules for programmable swarming”,J. J. Keya, M. Akter, A. M. R Kabir, M.R. Rashid, A. Kakugo, 219-230,Springer Nature,(2022), ISBN: 978-1-0716-1983-4

・「Methods in Molecular Biology, Microtubules-Methods and Protocols.」,H. Inaba (Eds),
“Fabrication of artificial muscle from microtubules, kinesins and DNA origami nanostructures”, J. J. Keya, A. M. R Kabir, S.Ishii, A. Kakugo, 231-240,Springer Nature,(2022), ISBN: 978-1-0716-1983-4

・「Methods in Molecular Biology, Microtubules-Methods and Protocols.」,H. Inaba (Eds),
“Dynamic pattern formation of active matters triggered by mechanical stimuli”, J. J. Keya, A. M. R Kabir, M. Akter, A. Kakugo, 193-203,Springer Nature,(2022), ISBN: 978-1-0716-1983-4

・「Methods in Molecular Biology, Microtubules-Methods and Protocols.」,H. Inaba (Eds),
“Purification of Tubulin from Porcine Brain and its Fluorescence Dye Modification”,S. Ishii, M. Akter, J. J. Keya, M. R. Rashid, F. Afroze, S. R. Nasrin, A. Kakugo, 3-16,Springer Nature,(2022), ISBN: 978-1-0716-1983-4

・「Methods in Molecular Biology, Microtubules-Methods and Protocols.」,H. Inaba (Eds),
“Mechanical deformation of microtubules on a two-dimensional elastic medium”,S. R. Nasrin, A. M. R Kabir, A Kakugo, 303-314, Springer Nature,(2022), ISBN: 978-1-0716-1983-4

・「Methods in Molecular Biology, Microtubules-Methods and Protocols.」,H. Inaba (Eds),
“Cargo transport by microtubule-associated motor protein along mechanically deformed microtubules”,S. R. Nasrin, A. M. R Kabir, A Kakugo,291-302, Springer Nature,(2022), ISBN: 978-1-0716-1983-4

・「Handbook of Unconventional Computing」, A. Adamatzky (Eds),
“Biomolecular Motor-based Computing”, A. M. R Kabir, A Kakugo, 451-464, World Scientific Publishing Company ,(2021), ISBN: 978-981-12-3503-0

・「Photosynergetic Responses in Molecules and Molecular Aggregates」, H. Miyasaka, T. Kawai, J. Abe, K. Matsuda (Eds),
“Interplay of photoisomerization and phase transition events provide a working supramolecular motor”, *Y. Kageyama, Springer ,(2020), ISBN: 978-981-15-5451-3

・「次世代のポリマー・高分子開発、新しい用途展開と将来展望」,宮田,
"高分子ゲルを用いた生体分子モーターとその応用、その可能性について", 栢野健太郎,角五彰, 333-345, 技術情報協会, (2019), ISBN: 978-4-86104-738-1

・「刺激応答性高分子ハンドブック」,宮田 隆志(Ed)“生体分子モーターを用いたソフトロボット”, 西川聖二・佐田和己・角五彰, 744-753 , NTS出版, (2018), ISBN: 978-4-86043-535-6

・「Molecular Technology Volume 1: Energy Innovation」, H. Yamamoto., T. Kato,
"Material Transfer and Spontaneous Motion in Mesoscopic Scale with Molecular Technology" Y.Kageyama,* Y.Takenaka, K.Higashiguchi,187-208,Wiley-VCH, (2018),ISBN: 978-3-527-80279-1

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