研究成果 - A01
【原著論文】      【書籍/総説・解説】
原著論文
・Decoding Polymer Chains via Gated Inclusion into Flexible Nanoporous Crystals
B. Manna, M. Asami, *N. Hosono, *T. Uemura, Chem, , DOI: 10.1016/j.chempr.2023.05.041, in press (2023)
・An approach to MOFaxanes by threading ultralong polymers through metal–organic framework microcrystals
R. R Watanabe, B. T. Kiper, M. Z. Zavala, M. Hara, R. Kobayashi, H. Ueno, J. J. G.Trejo, *C. B. Li, *H. Noji, Nat. Commun., 14, 3241 (2023), DOI: 10.1038/s41467-023-38835-5
・Rotary properties of hybrid F1--ATPases consisting of subunits from different species
T. Iizuka, H. Sano, B. L. Ouay, *N. Hosono, *T. Uemura, iScience, 26, 106626 (2023), DOI: 10.1016/j.isci.2023.106626
・A blue‑shifted anion channelrhodopsin from the Colpodellida alga Vitrella brassicaformis
*K. Kojima, S. Kawanishi, Y. Nishimura, M. Hasegawa, S. Nakao, Y. Nagata, S. Yoshizawa, & *Y. Sudo, Sci. Rep., 13, 6974 (2023), DOI:10.1038/s41598-023-34125-8
・Suppression of TDP-43 aggregation by artificial peptide binder targeting to its low complexity domain
*K. Kamagata, S. Kanbayashi, S. Koda, A. Kadotani, O. Ubukata, T. Tashima, Biochem. Biophys. Res. Commun., 662, 119-125 (2023). DOI: 10.1016/j.bbrc.2023.04.064
・N-terminal region of Drosophila melanogaster Argonaute2 forms amyloid-like aggregates
H. Narita, *T. Shima, R. Iizuka, S. Uemura, BMC Bio., 21,78 (2023), DOI: 10.1186/s12915-023-01569-3
・Concerted primary proton transfer reactions in a thermophilic rhodopsin studied by time-resolved Infrared spectroscopy at high temperature
K. Kuroi, T. Tsukamoto, N. Honda, *Y. Sudo, & *Y. Furutani, Biochim Biophys. Acta Bioenerg, 1864, 148980 (2023), DOI:10.1016/j.bbabio.2023.148980
・Fabrication of Polyelectrolyte Sheets of Unimolecular Thickness via MOF-Templated Polymerization
Nishijima, Y. Hayashi, K. Mayumi, N. Hosono, *T. Uemura, Macromolecules, 56, 3141–3148 (2023), DOI: 10.1021/acs.macromol.3c00275
・Quinoid-Based Three-Dimensional Metal–Organic Framework Fe2(dhbq)3: Porosity, Electrical Conductivity, and Solid-State Redox Properties
*S. Gupta, H. Tanaka, K. Fuku, K. Uchida, H. Iguchi, R. Sakamoto, H. Kobayashi, Y. Gambe, I. Honma, Y. Hirai, S. Hayami, and *S. Takaishi, Inorg. Chem., 62, 6306-6313 (2023), DOI: 10.1021/acs.inorgchem.2c04313
・Rational design of phase separating peptides based on phase separating protein sequence of p53
*K. Kamagata, A. Hando, M. Ariefai, N. Iwaki, S. Kanbayashi, R. Koike, K. Ikeda, Sci. Rep., 13, 5648 (2023), DOI: 10.1038/s41598-023-32632-2
・Structure and mechanism of oxalate transporter OxlT in an oxalate-degrading bacterium in the gut microbiota
T. J. Lahary, *T. Shimamura , M. Hayashi, N. Nomura, K. Hirasawa, T. Shimizu, M. Yamashita, N. Tsutsumi, Y. Suehiro, K. Kojima, Y. Sudo, T. Tamura, H. Iwanari, T. Hamakubo, S. Iwata, *K. I. Okazaki, *T. Hirai, & *A. Yamashita, Nat. Commun., 14, 1730 (2023), DOI:10.1038/s41467-023-36883-5
・Molecular mechanism on forcible ejection of ATPase inhibitory factor 1 from mitochondrial ATP synthase
R. Kobayashi, H. Ueno, K. I. Okazaki, *H. Noji, Nat. Commun., 14, 1682 (2023), DOI: 10.1038/s41467-023-37182-9
・Preference of CAMSAP3 for expanded microtubule lattice contributes to stabilization of the minus end
H. Liu, *T. Shima, Life Science Alliance, 6, e202201714 (2023), DOI: 10.26508/lsa.202201714
・Data Mining from XANES Spectra of Nickel Complexes for Structure Estimation
K. Fuku, *T. Yoshida, T. Sato, H. Iguchi, *S. Takaishi, R. Sakamoto, and H. Abe, Chem. Lett., 52, 289-291 (2023), DOI:10.1246/cl.230028
・Triptycene-Based Self-Assembled Monolayer as a Template for Successive Click Reactions
S. Das, F. Ishiwari, Y. Shoji, T. Fukushima, and *M. Zharnikov, J. Phys. Chem. C, 127, 5178–5185 (2023), DOI: 10.1021/acs.jpcc.3c00443
・Convergent evolution of animal and microbial rhodopsins
*K. Kojima, & *Y. Sudo, RSC Adv., 13, 5367-5381 (2022), DOI:10.1039/d3ra90016a
・Genetic Perturbation Alters Functional Substates in Alkaline Phosphatase
M. Sakuma, S. Honda, H. Ueno, K. V. Tabata, K. Miyazaki, N. Tokuriki, *H. Noji, J. Am. Chem. Soc., 145,2806-2814 (2023), DOI: 10.1021/jacs.2c06693
・Direct identification of the rotary angle of ATP cleavage in F1-ATPase from Bacillus PS3
*Y. Hasimoto, M. Sugawa, Y. Nishiguchi, F. Aeba, A. Tagawa, K. Suga, N. Tanaka, H. Ueno, H. Yamashita, R. Yokota, *T. Masaike, *T. Nishizaka, Biophys.J., 122, 554-564 (2023), DOI: 10.1016/j.bpj.2022.12.027
・Identification of a Functionally Efficient and Thermally Stable Outward Sodium-Pumping Rhodopsin (BeNaR) from a Thermophilic Bacterium
M. Kurihara, V. Thiel, H. Takahashi, K. Kojima, D. M. Ward, D. A. Bryant, M. Sakai, S. Yoshizawa, & *Y. Sudo, Chem. Pharm. Bull., 71, 154-164 (2023), DOI:10.1248/cpb.c22-00774
・Detection of membrane potential-dependent rhodopsin fluorescence using low-intensity light emitting diode for long-term imaging
S. Kawanishi, *K. Kojima, A. Shibukawa, M. Sakamoto, & *Y. Sudo, ACS Omega, 8,4826-4834 (2023), DOI:10.1021/acsomega.2c06980
・Surface Passivation of Lead Halide Perovskite Solar Cells by a Bifacial Donor–π–Donor Molecule
N. Minoi, *F. Ishiwari, K. Murotani, R. Nishikubo, T. Fukushima, and *A. Saeki, ACS Appl. Mater. Interfaces, 15, 6708–6715 (2023), DOI: 10.1021/acsami.2c18446
・Triptycene-Based Tripodal Self-Assembled Monolayer on Indium Tin Oxide
Saunak Das, F. Ishiwari, Y. Shoji, T. Fukushima, and *M. Zharnikov, J. Phys. Chem. C, , 127, 2088–2097 (2023), DOI: 10.1021/acs.jpcc.2c08390
・Topological Entrapment of Macromolecules During the Formation of Metal–Organic Framework
N. Mizutani, *N. Hosono, *T. Uemura, Chem. Commun., 59, 1293–1296 (2023), DOI: 10.1039/D2CC06330A
・Supramolecular Recognition within a Nanosized “Buckytrap” that Exhibits Substantial Photoconductivity
S. Sen, F. Ishiwari, R. Kaur, M. Ishida, D. Ray, K. Kikuchi, T. Mori, *S. Bähring, V. M. Lynch, *A. Saeki, *D. M. Guldi, *J. L. Sessler, and *A. Jana, , J. Am. Chem. Soc., 145, 1031-1039 (2023), DOI: 10.1021/jacs.2c10555
・Engineering Gas Separation Property of Metal–Organic Framework Membranes via Polymer Insertion
H. L. Hung, T. Iizuka, X. Deng, Q. Lyu, C. H. Hsu, N. Oe, *L. C. Lin, *N. Hosono, *D. Y. Kang, Sep. Purif. Technol., 310, 123115 (2023), DOI: 10.1016/j.seppur.2023.123115
・Overcoming the Entropy of Polymer Chains by Making a Plane with Terminal Groups: A Thermoplastic PDMS with a Long-Range 1D Structural Order
Y. Chen, *F. Ishiwari, T. Fukui, T. Kajitani, H. Liu, X. Liang, K. Nakajima, M. Tokita, and *T. Fukushima, Chem. Sci., ,14, 2431–2440 (2023), DOI: 10.1039/D2SC05491D
・Metal-dependent base pairing of bifacial iminodiacetic acid-modified uracil bases for switching DNA hybridization partner
K. Mori, *Y. Takezawa, *M. Shionoya, Chem. Sci., ,14, 1082–1088 (2023), DOI: 10.1039/D2SC06534G
・Thermodynamic Control of Intramolecular Singlet Fission and Exciton Transport in Linear Tetracene Oligomers
S. Nakamura, H. Sakai, M. Fuki, R. Ooie, F. Ishiwari, A. Saeki, *N. V. Tkachenko, *Y. Kobori, and *T. Hasobe, Angew. Chem. Int. Ed., 62, e202217704 (2023), DOI: 10.1002/anie.202217704
・Motor generated torque drives coupled yawing and orbital rotations of kinesin coated gold nanorods
M. Sugawa, Y, Maruyama, M. Yamagishi, R. A. Cross, *J. Yajima, Commun Biol.,5, 1368 (2022), DOI:10.1038/s42003-022-04304-w
・Structural Elements Involved in ATP Hydrolysis Inhibition and ATP Synthesis of Tuberculosis and Nontuberculous Mycobacterial F-ATP Synthase Decipher New Targets for Inhibitors
C. F. Wong, W. G. Saw, S. Basak, M. Sano, H Ueno, H. W. Kerk, D. Litty, P. Ragunathan, T. Dick, V. Müller, H. Noji, *G. Grüber, Antimicrob Agents Chemother.,66, e0105622 (2022), DOI: 10.1128/aac.01056-22
・CuII-mediated DNA base pairing of a triazole-4-carboxylate nucleoside prepared by click chemistry
L. Hu, *Y. Takezawa, *M. Shionoya, Chem. Commun. ,59, 892–895 (2023), DOI: 10.1039/d2cc06205d
・Single-Molecule Observation of Redox Reactions Enabled by Rigid and Isolated Tripodal Molecules
Y. Kobayashi, *Y. Yokota, R. A. Wong, M. Hong, J. Takeya, S. Osawa, F. Ishiwari, Y. Shoji, T. Harimoto, K. Sugimoto, Y. Ishigaki, *T. Suzuki, *T. Fukushima, and *Y. Kim, J. Phys. Chem. C, 127, 746 -758 (2023), DOI: 10.1021/acs.jpcc.2c07362
・3,11-Diaminodibenzo[a,j]phenazine: Synthesis, Properties, and Applications to Tröger’s Base-Forming Ladder Polymerization
S. Izumi, K. Inoue, Y. Nitta, T. Enjou, T. Ami, K. Oka, *N. Tohnai, S. Minakata, T. Fukushima, *F. Ishiwari, and *Y. Takeda, Chem. Eur. J., 29, e202202702 (2023), DOI: 10.1002/chem.202202702
・CuII-mediated stabilisation of DNA duplexes bearing consecutive ethenoadenine lesions and its application to a metal-responsive DNAzyme
S. C. Rajasree, *Y. Takezawa, *M. Shionoya, Chem. Commun. , 59, 1006–1009 (2023), DOI: 10.1039/d2cc06179a
・Fission yeast Dis1 is an unconventional TOG/XMAP215 that induces microtubule catastrophe to drive chromosome pulling
, Y. Murase, M. Yamagishi, N. Okada, M. Toya, J. Yajima, T. Hamada, M. Sato, Commun Biol., 5, 1298 (2022), DOI: 10.1038/s42003-022-04271-2
・Rotaxanes with Dynamic Mechanical Chirality: Systematic Studies on Synthesis, Enantiomer Separation, Racemization, and Chiral-Prochiral Interconversion
*F. Ishiwari and *T. Takata, Front. Chem., 10, 1025977 (2022), DOI: 10.3389/fchem.2022.1025977
・Coordination-driven Synthesis of a Self-assembled Architecture Bearing Urea Groups from a Triply Helical Fe(II) Complex of a Tripodal Ligand and a Pd(II) Complex
Y. Chiba, H. Fujii, T. Nakamura, *T. Nabeshima, Chem. Lett.,51, 1128 -1130 (2022), DOI: 10.1246/cl.220408
・Rotaxane formation by an allosteric pseudomacrocyclic anion receptor utilising kinetically labile copper(i) coordination properties
T. Aizawa, S. Akine, T. Saiki, T. Nakamura, *T. Nabeshima, Dalton Trans., 51, 17277-17282 (2022), DOI: 10.1039/D2DT03331C
・Direct observation of stepping rotation of V-ATPase reveals rigid component in coupling between Vo and V1 motors
A. Otomo, T. Iida, Y. Okuni, H. Ueno, T. Murata, R. Iino*, Proc Natl Acad Sci U S A., 119, e2210204119 (2022), DOI: 10.1073/pnas.2210204119
・Effects of Ammonium and Alkali Metal Additives on Anisotropic Photoconductivities and Solar Cell Efficiencies of Two-Dimensional Lead Halide Perovskites
R. Shimono, R. Nishikubo, F. Ishiwari, and *A. Saeki, J. Phys. Chem. C, 126, 17894-17903 (2022), DOI: 10.1021/acs.jpcc.2c06285
・Mutations conferring SO42− pumping ability on the cyanobacterial anion pump rhodopsin and the resultant unique features of the mutant
Y. Doi, J. Watanabe, R. Nii, T. Tsukamoto, M. Demura, Y. Sudo, & *T. Kikukawa, Sci. Rep., 12, 16422 (2022), DOI:10.1038/s41598-022-20784-6
・Anchoring geometry is a significant factor in determining the direction of kinesin-14 motility on microtubules
M. Yamagishi, R. Sumiyoshi, D. R. Drummond, *J. Yajima, Sci Rep.,12, 15417 (2022), DOI: 10.1038/s41598-022-19589-4
・Enzyme-based digital bioassay technology - key strategies and future perspectives
*H. Noji, Y. Minagawa, H. Ueno, Lab on a Chip,22, 3092-3109 (2022), DOI: 10.1039/d2lc00223j
・An Iron(II) Complex of a Tripodal 2,2′-Bipyridine with Perfluoroalkyl Linkers Showing Anion-dependent fac/mer Isomer Ratio
Y. Chiba, Z. Jin, T. Nakamura, *T. Nabeshima, Chem. Lett., 51, 1018-1021 (2022), DOI: 10.1246/cl.220314
・Rational peptide design for regulating liquid-liquid phase separation on the basis of residue-residue contact energy
*K. Kamagata, M. Ariefai, H. Takahashi, A. Hando, D. R. G. Subekti, K. Ikeda, A. Hirano, T. Kameda, Sci. Rep., 12, 13718 (2022), DOI: 10.1038/s41598-022-17829-1
・Torque generating properties of Tetrahymena ciliary three-headed outer-arm dynein
S. Yamaguchi, M. Yamagishi, *J. Yajima, Sci Rep., 12, 16722 (2022), DOI: 10.1038/s41598-022-21001-0
・Toughening and stabilizing MOF crystals via polymeric guest inclusion
T. Iizuka, N. Hosono, *T. Uemura, Dalton Trans., 51, 13204–13209 (2022), DOI 10.1039/D2DT01425D
・Synthesis and electrocatalysis of ordered carbonaceous frameworks from Ni porphyrin with four ethynyl groups
K. Chida, *T. Yoshii, M. Ohwada, Y. Hayasaka, J. Komeda, R. Sakamoto, J. Maruyama, K. Kamiya, M. Inoue, F. Tani, *H. Nishihara, Catal. Today, 411–412, 113830 (2023), DOI:10.1016/j.cattod.2022.06.045
・Improved Predictions of Organic Photovoltaic Performance through Machine Learning Models Empowered by Artificially Generated Failure Data
Y. Miyake, K. Kranthiraja, F. Ishiwari, and *A. Saeki, Chem. Mater., 34, 6912-6920 (2022), DOI: 10.1021/acs.chemmater.2c01294,
・Giant Carbon Nano-Test Tubes as Versatile Imaging Vessels for High-Resolution and In Situ Observation of Proteins
T. T. Chuong, T. Ogura, N. Hiyoshi, K. Takahashi, S. Lee, K. Hiraga, H. Iwase, A. Yamaguchi, K. Kamagata, E. Mano, S. Hamakawa, H. Nishihara, T. Kyotani, G. D. Stucky, *T. Itoh, ACS Appl. Mater. Interfaces, 14, 26507-26516 (2022), DOI: 10.1021/acsami.2c06318
・Exploration of Charge Transport Materials to Improve the Radiation Tolerance of Lead Halide Perovskite Solar Cells
Y. Murakami, R. Nishikubo, F. Ishiwari, K. Okamoto, T. Kozawa, and *A. Saeki, Mater. Adv., 3, 4861-4869 (2022), DOI: 10.1039/d2ma00385f
・Multivariate Analysis of Mixed Ternary and Quaternary A-Site Organic Cations in Tin Iodide Perovskite Solar Cells
E. Nakanishi, R. Nishikubo, F. Ishiwari, T. Nakamura, A. Wakamiya, and *A. Saeki, ACS Materials Lett., 4, 1124-1131 (2022), DOI: 10.1021/acsmaterialslett.2c00229
・How Does F1-ATPase Generate Torque?: Analysis From Cryo-Electron Microscopy and Rotational Catalysis of Thermophilic F1
, *H. Noji, H. Ueno, Front Microbiol, 13, 904084 (2022), DOI: 10.3389/fmicb.2022.904084
・Structure-dependent recruitment and diffusion of guest proteins in liquid droplets of FUS
*K. Kamagata, N. Iwaki, S. Kanbayashi, T. Banerjee, R. Chiba, V. Gaudon, B. Castaing, S. Sakomoto, Sci. Rep., 12, 7101 (2022). DOI: 10.1038/s41598-022-11177-w
・“Combinatorial Exploration of Monovalent Metals (M, M’) in Alkali, 11th-, and 13th-Group Elements toward (M/M’)–(Bi/Sb)–I Solar Cells
C. Nishikawa, R. Nishikubo, F. Ishiwari, and *A. Saeki, ACS Appl. Energy Mater., 5, 6291-6301 (2022), DOI:10.1021/acsaem.2c00651
・Two-Dimensional Metal–Organic Framework Acts as a Hydrogen Evolution Cocatalyst for Overall Photocatalytic Water Splitting
J. Guan, T. Pal, K. Kamiya, N. Fukui, H. Maeda, T. Sato, H. Suzuki, O. Tomita, H. Nishihara, *R. Abe, and *R. Sakamoto, ACS Catal., 12, 3881–3889 (2022), DOI: 10.1021/acscatal.1c05889
・Mixed Metal–Organic Framework Stationary Phases for Liquid Chromatography
K. Kioka, N. Mizutani, *N. Hosono, *T. Uemura, ACS Nano, 16, 6771-6780 (2022), DOI: 10.1021/acsnano.2c01592
・Phototriggered apoptotic cell death (PTA) Using the light-driven outward proton pump rhodopsin archaerhodopsin 3
S. Nakao, K. Kojima, & *Y. Sudo, J. Am. Chem. Soc., 144, 3771-3775 (2022), DOI: 10.1021/jacs.1c12608
・Activation of positive cooperativity by size-mismatch assembly via inclination of guests in a single-site receptor
T. Matsuno, K. Takahashi, K. Ikemoto, *H. Isobe, Chemistry An Asian Journal, published online (2022), DOI: 10.1002/asia.202200076
・Development of an outward proton pumping rhodopsin with a new record in thermostability by means of amino-acid mutations
S. Yasuda, T. Akiyama, K. Kojima, T. Ueta, T. Hayashi, S. Ogasawara, S. Nagatoishi, K.Tsumoto, N. Kunishima, Y. Sudo, *M. Kinoshita, & *T. Murata, J. Phys. Chem. B, 126, 1004-1015 (2022), DOI:10.1021/acs.jpcb.1c08684
・Manipulation of charge carrier flow in Bi4NbO8Cl nanoplate photocatalyst with metal loading
K. Ogawa, R. Sakamoto, C. Zhong, H. Suzuki, K. Kato, O. Tomita, K. Nakashima, A. Yamakata, T. Tachikawa, A. Saeki, *H. Kageyama, *R. Abe, Chem. Sci., 13, 3118-3128(2022), DOI: 10.1039/d1sc06054f
・Proton transfer pathway in anion channelrhodopsin-1
M. Tsujimura, K. Kojima, S. Kawanishi, *Y. Sudo, *H. Ishikita, eLife, 10, e72264(2021) DOI: 10.7554/eLife.72264
・Exploring the retinal binding cavity of archaerhodopsin-3 by replacing the retinal chromophore with a dimethyl phenylated derivative
T. Tsuneishi, M. Takahashi, M. Tsujimura, K. Kojima, H. Ishikita, Y. Takeuchi, *Y. Sudo, Front. Mol. Biosci., 8, 794948 (2021), DOI:10.3389/fmolb.2021.794948
・De novo design of a nanopore for single-molecule detection that incorporates a β-hairpin peptide
K. Shimizu, B. Mijiddorj, M. Usami, I. Mizoguchi, S. Yoshida, S. Akayama, Y. Hamada, A. Ohyama, K. Usui, I. Kawamura, *R. Kawano, Nature Nanotechnology, 17,67-75(2022), DOI:10.1038/s41565-021-01008-w
・Introduction of Triptycene with a Particular Substitution Pattern into Polymer Chains Can Dramatically Improve the Structural and Rheological Properties
*F. Ishiwari, G. Okabe, T. Kajitani, and *T. Fukushima, ACS Macro Lett., 10,1529(2021), DOI:10.1021/acsmacrolett.1c00660
・Three-dimensional tracking of the ciliate Tetrahymena reveals the mechanism of ciliary stroke-driven helical swimming.
A. Marumo, M. Yamagishi, *J. Yajima, Commun. Biol., 4,1209(2021), DOI:10.1038/s42003-021-02756-0
・Bipyridine-Modified DNA Three-Way Junctions with Amide Linkers: Metal-Dependent Structure Induction and Self-Sorting
*Y. Takezawa, S. Sakakibara, *M. Shionoya, Chem. Eur. J., 67,16626–16633 (2021), DOI:10.1002/chem.202102977
・An optogenetic assay method for electrogenic transporters using Escherichia coli co-expressing light-driven proton pump
M. Hayashi, K. Kojima, *Y. Sudo, & *A. Yamashita, Protein Sci., 30,2161-2169(2021), DOI:10.1002/pro.4154
・Microbial rhodopsins as multi-functional photoreactive membrane proteins for optogenetics
S. Nakao, K. Kojima, & *Y. Sudo, Biol Pharm. Bull., 44,1357-1363 (2021), DOI:10.1248/bpb.b21-00544
・Molecular principles of recruitment and dynamics of guest proteins in liquid droplets
*K. Kamagata, N. Iwaki, M. K. Hazra, S. Kanbayashi, T. Banerjee, R. Chiba, S. Sakomoto, V. Gaudon, B. Castaing, H. Takahashi, M. Kimura, H. Oikawa, S. Takahashi, Y. Levy, Sci. Rep.,11,19323 (2021) (2021), DOI:10.1038/s41598-021-98955-0
・Synthesis and chiral resolution of twisted carbon nanobelts
W. Fan, T. Matsuno, Y. Han, X. Wang, Q. Zhou, *H. Isobe, *J. Wu, Journal of the American Chemical Society,143,15924-15929 (2021), DOI:10.1021/jacs.1c08468
・Simple Fabrication of Solid-State Nanopores on a Carbon Film
N. Takai, K. Shoji, T. Maki, R. Kawano, Micromachines,12,1135 (2021), DOI: 10.3390/mi12091135
・A hybrid molecular peapod of sp2- and sp3-nanocarbons enabling ultrafast terahertz rotations
*T. Matsuno, S. Terasaki, K. Kogashi, R. Katsuno, *H. Isobe, Nat. Commun.,12,5062 (2021), DOI: 10.1038/s41467-021-25358-0
・Amplification of over 100 kbp DNA from Single Template Molecules in Femtoliter Droplets
H. Ueno, H. Sawada, N. Soga, M. Sano, S. Nara, K. V. Tabata, M. Su’etsugu, *H. Noji, ACS Synth. Biol.,10,2179-2186 (2021), DOI:10.1021/acssynbio.0c00584
・Revisiting Molecular Adsorption: Unconventional Uptake of Polymer Chains from Solution into Sub-Nanoporous Media
N. Oe, *N. Hosono, *T. Uemura, Chem. Sci.,12,12576–12586 (2021), DOI:10.1039/D1SC03770F
・Evidence of C–F···H–C Attractive Interaction: Enforced Coplanarity of a Tetrafluorophenylene-Ethynylene-Linked Porphyrin Dimer
*M. Morisue, M. Kawanishi, I. Ueno, T. Nakamura, T. Nabeshima, K. Imamura, and K. Nozaki, J. Phys. Chem. B,125,9286 (2021), DOI:10.1021/acs.jpcb.1c04504
・Structure of a retinal chromophore of dark-adapted middle rhodopsin as studied by solid-state nuclear magnetic resonance spectroscopy
I. Kawamura, H. Seki, S. Tajima, Y. Makino, A. Shigeta, T. Okitsu, A. Wada, A. Naito, & Y. Sudo, Biophys. Physicobiol.,18,177-185 (2021), DOI:10.2142/biophysico.bppb-v18.019
・Testing mechanisms of DNA sliding by architectural DNA binding proteins: dynamics of single wild-type and mutant protein molecules in vitro and in vivo
*K. Kamagata, Y. Itoh, C. Tan, E. Mano, Y. Wu, Sridhar Mandali, S. Takada, *R. C. Johnson, Nucleic Acids Research,49,8642-8664 (2021), DOI:10.1093/nar/gkab658
・The six steps of the complete F1-ATPase rotary catalytic cycle
M. Sobti, H. Ueno, H. Noji, A. G. Stewart, Nat. Commun.,12,4690 (2021), DOI:10.1038/s41467-021-25029-0
・Functional expression of the eukaryotic proton pump rhodopsin OmR2 in Escherichia coli and its photochemical characterization
M. Kikuchi, K. Kojima, S. Nakao, S. Yoshizawa, S. Kawanishi, A. Shibukawa, T. Kikukawa, & *Y. Sudo, Sci. Rep.,11, 14756 (2021), DOI:10.1038/s41598-021-94181-w
・Ultralong π-Conjugated Bis(terpyridine)metal Polymer Wires Covalently Bound to a Carbon Electrode: Fast Redox Conduction and Redox Diode Characteristics
KH. Wu, *R. Sakamoto, H. Maeda, E. Jia, H. Phua, *H. Nishihara, Molecules,26, 4267 (2021), DOI:10.3390/molecules26144267
・Engineering of the genome editing protein Cas9 to slide along DNA
T. Banerjee, H. Takahashi, D. Rendra G. Subekti, *K. Kamagata, Sci. Rep.,11, 14165 (2021), DOI:10.1038/s41598-021-93685-9
・Manipulations of chiroptical properties in belt-persistent cycloarylenes via desymmetrization with heteroatom doping
T. M Fukunaga, C. Sawabe, T. Matsuno, J. Takeya, T. Okamoto,*H. Isobe, Angewandte Chemie International Edition,60, 19097-19101 (2021), DOI:10.1002/anie.202106992
・Characterization of the motility of monomeric kinesin-5/Cin8.
M. Yamagishi, Y. Maruyama, M. Sugawa, *J. Yajima, Biochem Biophys Res Commun.,555, 115-120 (2021), DOI:10.1016/j.bbrc.2021.03.134
・Layered Perovskite Oxyiodide with Narrow Band Gap and Long Lifetime Carriers for Water Splitting Photocatalysis
K. Ogawa, H. Suzuki, C. Zhong, R. Sakamoto, O. Tomita, A. Saeki, H. Kageyama,*R. Abe, J. Am. Chem. Soc.,143, 8446–8453 (2021), DOI:10.1021/jacs.1c02763
・Elucidation and control of low and high active populations of alkaline phosphatase molecules for quantitative digital bioassay
H. Ueno, M. Kato ,Y. Minagawa, Y, Hirose, *H. Noji, Protein Science,30,1628-1639(2021), DOI:10.1002/pro.4102
・Earth-abundant iron(iii) species serves as a cocatalyst boosting the multi-electron reduction of IO3−/I− redox shuttle in Z-scheme photocatalytic water splitting
K. Murofushi, K. Ogawa, H. Suzuki, R. Sakamoto, O. Tomita, K. Kato, A Yamakata, A. Saeki, *R. Abe, J. Mater. Chem. A,9,11718-11725(2021), DOI: 10.1039/d1ta01703a
・Exclusive formation of a meridional complex of a tripodand and perfect suppression of guest recognition
H. Morita, S. Akine, T. Nakamura, *T. Nabeshima, Chem. Sci.,12,7720 (2021), DOI: 10.1039/D1SC01529J
・Metal-mediated DNA base pairing of easily prepared 2-oxo-imidazole-4-carboxylate nucleotides
L. Hu, *Y. Takezawa, *M. Shionoya, Chem. Sci.,13,3977-3983 (2022), DOI: 10.1039/d2sc00926a
・Metal‐Organic Frameworks for Practical Separation of Cyclic and Linear Polymers
T. Sawayama, Y. Wang, T. Watanabe, M. Takayanagi, T. Yamamoto, *N. Hosono, *T. Uemura, Angew. Chem. Int. Ed.,60,11830-11834 (2021), DOI: 10.1002/anie.202102794
・Stereoselectivity in spontaneous assembly of rolled incommensurate carbon bilayers
T. Matsuno, Y. Ohtomo, M. Someya & H. Isobe, Nature Communications,12,1575 (2021), DOI: 10.1038/s41467-021-21889-8
・Kinetic analysis of the inhibition mechanism of bovine mitochondrial F1-ATPase inhibitory protein using biochemical assay
R. Kobayashi, S. Mori, H. Ueno, *H. Noji, J. Biochem.,170,79-87 (2021),DOI:10.1093/jb/mvab022
・Further thermo-stabilization of thermophilic rhodopsin from Thermus thermophilus JL-18 through engineering in extramembrane regions
T. Akiyama, *N. Kunishima, S. Nemoto, K. Kazama, M. Hirose, Y. Sudo, Y. Matsuura, H. Naitow, & *T. Murata, Proteins,89,301-310 (2021),DOI:10.1002/prot.26015
・Synthesis, band structure and photocatalytic property of Sillén−Aurivillius oxychlorides BaBi5Ti3O14Cl, Ba2Bi5Ti4O17Cl and Ba3Bi5Ti5O20Cl with triple-, quadruple- and quintuple-perovskite layers
D. Ozaki, H. Suzuki, K. Ogawa, R. Sakamoto, Y. Inaguma, K. Nakashima, O. Tomita, H. Kageyama, *Ryu Abe, J. Mater. Chem. A,9,8332-8340 (2021),DOI:10.1039/D0TA12550D
・Fused quinoidal dithiophene‐based helicenes: Synthesis by intramolecular radical-radical coupling reactions and dynamics of interconversion of enantiomers
G. Li, T. Matsuno, Y. Han, S. Wu, Y. Zou, Q. Jiang, *H. Isobe, *Jishan Wu, Angew. Chem. Int. Ed.,60,10326-10333 (2021),DOI:10.1002/anie.202100606
・CYK4 relaxes the bias in the off-axis motion by MKLP1 kinesin-6
Y. Maruyama, M. Sugawa, S. Yamaguchi, T. Davies, T. Osaki, M. Yamagishi, S. Takeuchi, *M. Mishima & *J. Yajima, Commun. Biol.,4,180 (2021),DOI:10.1038/s42003-021-01704-2
・Crystal Flexibility Design through Local and Global Motility Cooperation
P. Wang , *K. Otake, N. Hosono, *S. Kitagawa, Angew. Chem. Int. Ed.,60,7030–7035 (2021),DOI:10.1002/anie.202015257
・Bacterium lacking a known gene for retinal biosynthesis possesses functional rhodopsins
Y. Nakajima, K. Kojima, Y. Kashiyama, S. Doi, R. Nakai, Y. Sudo, K. Kogure, & *S. Yoshizawa, Microbes and Environments,,35,ME20085 (2020),DOI:10.1264/jsme2.ME20085
・Lokiarchaeota archaeon Schizorhodopsin-2 (LaSzR2) is an inward proton pump displaying a characteristic feature of acid-induced spectral blue-shift
K. Kojima, S. Yoshizawa, M. Hasegawa, M. Nakama, M. Kurihara, T. Kikukawa, & *Y. Sudo Sci. Rep.,10,20857 (2020),DOI:10.1038/s41598-020-77936-9
・The 3×120º rotary mechanism of Paracoccus denitrificans F1-ATPase is different from that of the bacterial and mitochondrial F1-ATPases
*M. Zarco- Zavala, R. Watanabe, D. G. G. McMillan, T. Suzuki, H. Ueno, F. Mendoza-Hoffmann,*J. J. García-Trejo, *H. Noji Proc Natl Acad Sci U S A.,14,1760-1770 (2020),DOI:10.1021/acsnano.0c06981
・Analytical Model for Particle Capture in Nanopores Elucidates Competition among Electrophoresis, Electroosmosis, and Dielectrophoresis
*M. Chinappi, M. Yamaji, R. Kawano, and *F. Cecconi,ACS Nano,14,1760-1770 (2020),DOI:10.1021/acsnano.0c06981
・Applicability of styrene-maleic acid copolymer for two microbial rhodopsins, RxR and HsSRI
T. Ueta, K. Kojima, T. Hino, M. Shibata, S. Nagano, & *Y. Sudo,Biophys. J.,119,1760-1770 (2020),DOI:10.1016/j.bpj.2020.09.026
・A case study of stereoisomerism with [6]cyclo[4]helicenylene
T. Matsuno, Y. Yang, Y. Nanjo, *H. Isobe, *S. Sato, Chem. Lett.,50110-112,DOI:10.1246/cl.200717
・A unique clade of light‑driven proton‑pumping rhodopsins evolved in the cyanobacterial lineage
M. Hasegawa, T. Hosaka, K. Kojima, Y. Nishimura, Y. Nakajima, T. Kimura-Someya, M. Shirouzu, Y. Sudo, & *S. Yoshizawa,Sci. Rep.,1016752 (2020),DOI:10.1038/s41598-020-73606-y
・In vitro reconstitution of Dynein force exertion in a bulk viscous medium
H. Palenzuela, B. Lacroix, J. Salle, K. Minami, T. Shima, A. Jegou, *G. Romet-Lemonne, *N. Minc Currt Biol.,30,4534-4540.e7 (2020),DOI:10.1016/j.cub.2020.08.078
・Modeling a Microtubule Filaments Mesh Structure from Confocal Microscopy Imaging
*Y. Ueno, K. Matsuda, K. Katoh, A. Kuzuya, A. Kakugo, A. Konagaya Micromachines,11, 3844 (2020),DOI:10.3390/mi11090844
・Crystalline naphthylene macrocycles capturing gaseous small molecules in chiral nanopores
T. Matsuno, K. Fukunaga, S. Kobayashi, P. Sarkar, S. Sato, T. Ikeda, *H. Isobe Chem. Asian J.,15, 3829-3835 (2020),DOI:10.1002/asia.202000876
・Metal–Organic Frameworks for Macromolecular Recognition and Separation
*N. Hosono, *T. Uemura, Matter ,3, 652–663 (2020),DOI:10.1016/j.matt.2020.06.013
・The N‐terminal β‐strand of single‐headed kinesin‐1 can modulate the off‐axis force‐generation and resultant rotation pitch
M. Yamagishi, S. Fujimura, M. Sugawa, T. Nishizaka, *J. Yajima, Cytoskeleton ,77,351-361 (2020),DOI:10.1002/cm.21630
・Analysis of Membrane Protein Deinsertion-Associated Currents with Nanoneedle-Supported Bilayers to Discover Pore Formation Mechanisms
*K. Shoji, R. Kawano, and *R. J. White, Langmuir. ,36,10012-10021 (2020),DOI:10.1021/acs.langmuir.0c00833
・Comparative studies of the fluorescence properties of microbial rhodopsins: Spontaneous emission versus photo-intermediate fluorescence
K. Kojima, R. Kurihara, M. Sakamoto, T. Takanashi, H. Kuramochi, X. M. Zhang, H. Bito, T. Tahara, & *Y. Sudo, J. Phys. Chem. B ,124,7361-7367 (2020),DOI:10.1021/acs.jpcb.0c06560
・Green-sensitive, long-lived, step-functional anion channelrhodopsin-2 variant as a high-potential neural silencing tool
K. Kojima, N. Miyoshi, A. Shibukawa, S. Chowdhury, M. Tsujimura, T. Noji, H. Ishikita, A. Yamanaka, & *Y. Sudo, J. Phys. Chem. Lett. ,11,6214-6218 (2020),DOI:10.1021/acs.jpclett.0c01406
・Unimolecularly Thick Monosheets of Vinyl Polymers Fabricated in Metal–Organic Frameworks
N. Hosono, S. Mochizuki, Y. Hayashi, *T. Uemura, Nat. Commun. ,11,3573 (2020),DOI:10.1038/s41467-020-17392-1
・Tight chemomechanical coupling of the F1 motor relies on structural stability
M. Tanaka, T. Kawakami, T. Okaniwa, Y. Nakayama, S. Toyabe, *H. Ueno, *E. Muneyuki, Biophys. J. ,119,48-54(2020),DOI:10.1016/j.bpj.2020.04.039
・Recessed Ag/AgCl Microelectrode-Supported Lipid Bilayer for Nanopore Sensing
*K. Shoji, R. Kawano, and *R. J. White, Analytical Chemistry ,92,10856-10862 (2020), DOI: 10.1021/acs.analchem.0c02720
・Ineffective OH-pinning of the flipping dynamics of a spherical guest within a tight-fitting tube
*T. Matsuno, M. Someya, S. Sato, S. Maeda, Angew. Chem. Int. Ed. ,59,14570-14576 (2020), DOI: 10.1002/anie.202005538
・Structural Deformation Energy Modulation Strategy in a Soft Porous Coordination Polymer with Interpenetrated Framework
Y. Gu, J. J. Zheng, K. Otake, K. Sugimoto, N. Hosono, S. Sakaki, *F. Li, *S. Kitagawa, Angew. Chem. Int. Ed. ,59,15517-15521(2020), DOI: 10.1002/anie.202003186
・How Cytoplasmic Dynein Couples ATP Hydrolysis Cycle to Diverse Stepping Motions: Kinetic Modeling
S. Kubo, T. Shima, *S. Takada, Biophys. J. ,118,1930-1945 (2020), DOI: 10.1016/j.bpj.2020.03.012
・Dynamic behavior of an artificial protein needle contacting a membrane observed by high-speed atomic force microscopy
*T. Ueno, K. Niwase, D. Tsubokawa, K. Kikuchi, N. Takai, T. Furuta, R. Kawano, T. Uchihashi, Nanoscale, 12, 8166-8173 (2020), DOI: 10.1039/D0NR01121E
・Methodology for further thermostabilization of an intrinsically thermostable membrane protein using amino-acid mutations with its original function being retained?
S. Yasuda, T. Akiyama, S. Nemoto, T. Hayashi, T. Ueta, K. Kojima, T. Tsukamoto, S. Nagatoishi, K. Tsumoto, Y. Sudo, *M. Kinoshita, & *T. Murata, J. Chem. Inf. Model., 60, 1709-1716 (2020), DOI: 10.1021/acs.jcim.0c00063
・‘Click’ conjugated porous polymer nanofilm with a large domain size created by a liquid/liquid interfacial protocol
J. Komeda, R. Shiotsuki, A. Rapakousiou, *R. Sakamoto, R. Toyoda, K. Iwase, M. Tsuji, K. Kamiya, H. Nishihara, Chem. Commun., 56, 3677-3680 (2020), DOI: 10.1039/D0CC00360C
・How Does a Microbial Rhodopsin RxR Realize Its Exceptionally High Thermostability with the Proton-Pumping Function Being Retained?
T. Hayashi, S. Yasuda, K. Suzuki, T. Akiyama, K. Kanehara, K. Kojima, M. Tanabe, R. Kato, T. Senda, Y. Sudo, *T. Murata, & *M. Kinoshita, J. Phys. Chem. B, 124, 990-1000 (2020), DOI: 10.1021/acs.jpcb.9b10700
・Recognition of Polymer Terminus by Metal–Organic Frameworks Enabling Chromatographic Separation of Polymers
N. Mizutani, N. Hosono, B. L. Ouay, T. Kitao, R. Matsuura, T. Kubo, *T. Uemura, J. Am. Chem. Soc., 142, 3701–3705 (2020), DOI: 10.1021/jacs.9b13568
・Observation of an Exotic State of Water in the Hydrophilic Nanospace of Porous Coordination Polymers
*T. Ichii, T. Arikawa, K. Omoto, N. Hosono, H. Sato, S. Kitagawa, *K. Tanaka, Commun. Chem., 3, 16 (2020), DOI: 10.1038/s42004-020-0262-9
・Small stepping motion of processive dynein revealed by load-free high-speed single-particle tracking
J. Ando, T. Shima, R. Kanazawa, R. Shimo-Kon, A. Nakamura, M. Yamamoto, T. Kon and R. Iino,
Scientific Reports , 10, 1080(2020), DOI:10.1038/s41598-020-58070-y
・Rotary catalysis of bovine mitochondrial F1-ATPase studied by single-molecule experiments
R. Kobayashi, H. Ueno, C. B. Li, *H. Noji, Proc. Natl. Acad. Sci. USA., 117, 1447-1456 (2020), DOI:10.1073/pnas.1909407117
・Regioselective Chemical Modification of Cysteine Residues on Protein Surfaces Focusing on Local Environment around the Conjugation Site
T. Miyale, R. Tamaki, M. Asanuma, Y. Fukada, S. Hirota, *T. Matsuo, Bioconjugate Chem., 31, 794 (2020), DOI: 10.1021/acs.bioconjchem.9b00869
・Vectorial proton transport mechanism of RxR, a phylogenetically distinct and thermally stable microbial rhodopsin
K. Kojima, T. Ueta, T. Noji, K. Saito, K. Kanehara, S. Yoshizawa, H. Ishikita & *Y. Sudo, Sci. Rep., 10, 282 (2020), DOI:10.1038/s41598-019-57122-2
・Visualizing dynamic actin cross-linking processes driven by the actin-binding protein anillin
K. Matsuda, M. Sugawa, M. Yamagishi, *N. Kodera, *J. Yajima, FEBS Letters, 594, 1237-1247, DOI: 10.1002/1873-3468.13720
・Porphyrin-Based Probe for Simultaneous Detection of Interface Acidity and Polarity during Lipid-Phase Transition of Vesicles
R. Majumder, S. Roy, K. Okamoto, S. Nagao, *T. Matsuo, *P. P. Parui, Langmuir, 36, 426 (2020), DOI: 10.1021/acs.langmuir.9b02781
・Regulated single‐axis rotations of a carbonaceous guest in a van der Waals complex with an entropy cost
T. Matsuno, Y. Nakai, Y. Maniwa, M. Someya, S. Sato, *H. Isobe, Chemistry An Asian Journal, 15, 273-278 (2020), DOI: 10.1002/asia.201901638
・Pseudo Gated Adsorption with Negligible Volume Change Evoked by Halogen Bond Interaction in the Nanospace of MOFs
P. Kanoo, R.Matsuda,*H. Sato, L. Li, N. Hosono, S. Kitagawa, Chem. Eur. J., 26, 2148–2153 (2020), DOI: 10.1002/chem.201904703
・Application of High-Sensitivity UV photoemission Spectroscopy to Examine the Electronic Structure of Thermophilic Rhodopsin
D. Sano, I. Ide, T. Akiyama, Y. Tanaka, Y. Sudo, T. Murata & H. Ishii, Mol. Crys. Liq. Crys., 687, 34-39 (2019), DOI: 10.1080/15421406.2019.1648052
・A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators
D. M. Needham, S. Yoshizawa, T. Hosaka, C. Poirier, C. J. Choi, E. Hehenberger, N. A. T. Irwin, S. Wilken, C. M. Yung, C. Bachy, R. Kurihara, Y. Nakajima, K. Kojima, T. Kimura-Someya, G. Leonard, R. R. Malmstrom, D. R. Mende, D. K. Olson, Y. Sudo, S. Sude, T. A. Richard, E. F. DeLong, P. J. Keeling, A. E. Santoro, M. Shirouzu, *W. Iwasaki, & *A. Z. Worden, Proc. Natl. Acad. Sci. USA, 116, 20574-20583 (2019), DOI: 10.1073/pnas.1907517116
・Tri‐ and Tetranuclear Metal‐String Complexes with Metallophilic d10–d10 Interactions
M. Olaru, J. F. Kögel, R. Aoki, R. Sakamoto, H. Nishihara, E. Lork, *S. Mebs, *M. Vogt, *J. Beckmann, Eur. J. Inorg. Chem., 26, 275-284 (2020), DOI: 10.1002/chem.201904106
・Application of DNA Quadruplex Hydrogels Prepared from Polyethylene Glycol-Oligodeoxynucleotide Conjugates to Cell Culture Media
S. Tanaka, S. Yukami, Y. Hachiro, *Y. Ohya, *A. Kuzuya, Polymers, 11, 1607 (2019), DOI: 10.3390/polym11101607
・Carbon Dioxide Capture and Efficient Fixation in a Dynamic Porous Coordination Polymer
Pengyan Wu, Y. Li, J. J. Zheng, N. Hosono, J. Wang, * K. Otake, Y. Liu, L. Xia, M. Jiang, S. Sakaki, *S. Kitagawa, Nat. Commun. , 10, 4362 (2019), DOI:10.1038/s41467-019-12414-z
・Single-molecule analysis reveals rotational substeps and chemo-mechanical coupling scheme of
Enterococcus hirae V1-ATPase
T. Iida, Y. Minagawa, H. Ueno, F. Kawai, T. Murata and *R. Iino,
J. Biol. Chem. (2019), DOI:10.1074/jbc.RA119.008947
・Accurate high-throughput screening based on digital protein synthesis in a massively parallel femtoliter droplet array
*Y. Zhang, Y. Minagawa, H. Kizoe, K. Miyazaki, R. Iino, H. Ueno, K. Tabata, Y. Shimane, *H. Noji, Sci. Adv., 5, eaav8185 (2019), DOI: 10.1126/sciadv.aav8185
・Electrophysiological Analysis of Antimicrobial Peptides in Diverse Species
N. Saigo, K. Izumi, *R. Kawano, ACS Omega, 4, 13124-13130 (2019), DOI:10.1021/acsomega.9b01033
・Mobile imaging platform for digital influenza virus counting
Y. Minagawa, Y. Minagawa#, H. Ueno#, K. V. Tabata, *H. Noji (#equally contributed), Lab Chip , 19, 2678-2687 (2019), DOI:10.1039/C9LC00370C
・Retarded solid‐state rotations of an oval‐shaped guest in a deformed cylinder with CH–π arrays
T. Matsuno, K. Fukunaga, S. Sato, *H. Isobe, Angew. Chem. Int. Ed. , 58 , 12170-12174 (2019), DOI: 10.1002/anie.201907040
・Photochemical Characterization of a New Heliorhodopsin from the Gram-Negative Eubacterium Bellilinea caldifistulae (BcHeR) and Comparison with Heliorhodopsin-48C12
A. Shibukawa, K. Kojima, Y. Nakajima, Y. Nishimura, S. Yoshizawa, *Y. Sudo, Biochemistry , 58, 2934-2943(2019) , DOI:10.7554/eLife.44928.
・Electrochromic triphenylamine-based cobalt(II) complex nanosheets
Y. Liu, R. Sakamoto, *C. L. Ho, *H. Nishihara, *W.Y. Wong, J. Mater. Chem. C , 7, 9159-9166 (2019), DOI: 10.1039/c9tc02257k
・GABA neurons in the ventral tegmental area regulate non-rapid eye movement sleep in mice
S. Chowdhury, T. Matsubara, T. Miyazaki, D. Ono, N. Fukatsu, M. Abe, K. Sakimura, Y. Sudo, *A. Yamanaka, Elife , 8, e44928 (2019), DOI:10.7554/eLife.44928.
・Quantitation of the neural silencing activity of anion channelrhodopsins in Caenorhabditis elegans and their applicability for long-term illumination
T. Yamanashi, M. Maki, K. Kojima, A. Shibukawa, T. Tsukamoto, S. Chowdhury, A. Yamanaka, S. Takagi, *Y. Sudo, Sci Rep., 9, 7863 (2019), DOI:110.1038/s41598-019-44308-x.
・Microwave‐Assisted Hydrothermal Synthesis of [Al (OH)(1,4‐NDC)] Membranes with Superior Separation Performances
*Yi Liu, Akihiro Hori, Shinpei Kusaka, N. Hosono, M. Li, A. Guo, D. Du, Y. Li, W. Yang, Y. Ma, *R. Matsuda, Chem. Asian J., 14, 2072–2076 (2019), DOI: 10.1002/asia.201900152
・Artificial Smooth Muscle Model Composed of Hierarchically Ordered Microtubule Asters Mediated by DNA Origami Nanostructures
K. Matsuda, A. M. R. Kabir, N. Akamatsu, A. Saito, S. Ishikawa, Tsuyoshi Matsuyama, O. Ditzer, M. S. Islam, Y. Ohya, K. Sada, A. Konagaya, *A. Kuzuya, *A. Kakugo, Nano Letters, 19, 3933-3938 (2019), DOI: 10.1021/acs.nanolett.9b01201
・Interfacial transmetallation synthesis of a platinadithiolene nanosheet as a potential 2D topological insulator
T. Pal, S. Doi, H. Maeda, K. Wada, C. M. Tan, N. Fukui, R. Sakamoto, S. Tsuneyuki, S. Sasaki, *H. Nishihara, Chemical Science , 10, 5218-5225 (2019), DOI: 10.1039/C9SC01144G
・Decoding Polymer Chains via Gated Inclusion into Flexible Nanoporous Crystals
B. Manna, M. Asami, *N. Hosono, *T. Uemura, Chem, , DOI: 10.1016/j.chempr.2023.05.041, in press (2023)
・An approach to MOFaxanes by threading ultralong polymers through metal–organic framework microcrystals
R. R Watanabe, B. T. Kiper, M. Z. Zavala, M. Hara, R. Kobayashi, H. Ueno, J. J. G.Trejo, *C. B. Li, *H. Noji, Nat. Commun., 14, 3241 (2023), DOI: 10.1038/s41467-023-38835-5
・Rotary properties of hybrid F1--ATPases consisting of subunits from different species
T. Iizuka, H. Sano, B. L. Ouay, *N. Hosono, *T. Uemura, iScience, 26, 106626 (2023), DOI: 10.1016/j.isci.2023.106626
・A blue‑shifted anion channelrhodopsin from the Colpodellida alga Vitrella brassicaformis
*K. Kojima, S. Kawanishi, Y. Nishimura, M. Hasegawa, S. Nakao, Y. Nagata, S. Yoshizawa, & *Y. Sudo, Sci. Rep., 13, 6974 (2023), DOI:10.1038/s41598-023-34125-8
・Suppression of TDP-43 aggregation by artificial peptide binder targeting to its low complexity domain
*K. Kamagata, S. Kanbayashi, S. Koda, A. Kadotani, O. Ubukata, T. Tashima, Biochem. Biophys. Res. Commun., 662, 119-125 (2023). DOI: 10.1016/j.bbrc.2023.04.064
・N-terminal region of Drosophila melanogaster Argonaute2 forms amyloid-like aggregates
H. Narita, *T. Shima, R. Iizuka, S. Uemura, BMC Bio., 21,78 (2023), DOI: 10.1186/s12915-023-01569-3
・Concerted primary proton transfer reactions in a thermophilic rhodopsin studied by time-resolved Infrared spectroscopy at high temperature
K. Kuroi, T. Tsukamoto, N. Honda, *Y. Sudo, & *Y. Furutani, Biochim Biophys. Acta Bioenerg, 1864, 148980 (2023), DOI:10.1016/j.bbabio.2023.148980
・Fabrication of Polyelectrolyte Sheets of Unimolecular Thickness via MOF-Templated Polymerization
Nishijima, Y. Hayashi, K. Mayumi, N. Hosono, *T. Uemura, Macromolecules, 56, 3141–3148 (2023), DOI: 10.1021/acs.macromol.3c00275
・Quinoid-Based Three-Dimensional Metal–Organic Framework Fe2(dhbq)3: Porosity, Electrical Conductivity, and Solid-State Redox Properties
*S. Gupta, H. Tanaka, K. Fuku, K. Uchida, H. Iguchi, R. Sakamoto, H. Kobayashi, Y. Gambe, I. Honma, Y. Hirai, S. Hayami, and *S. Takaishi, Inorg. Chem., 62, 6306-6313 (2023), DOI: 10.1021/acs.inorgchem.2c04313
・Rational design of phase separating peptides based on phase separating protein sequence of p53
*K. Kamagata, A. Hando, M. Ariefai, N. Iwaki, S. Kanbayashi, R. Koike, K. Ikeda, Sci. Rep., 13, 5648 (2023), DOI: 10.1038/s41598-023-32632-2
・Structure and mechanism of oxalate transporter OxlT in an oxalate-degrading bacterium in the gut microbiota
T. J. Lahary, *T. Shimamura , M. Hayashi, N. Nomura, K. Hirasawa, T. Shimizu, M. Yamashita, N. Tsutsumi, Y. Suehiro, K. Kojima, Y. Sudo, T. Tamura, H. Iwanari, T. Hamakubo, S. Iwata, *K. I. Okazaki, *T. Hirai, & *A. Yamashita, Nat. Commun., 14, 1730 (2023), DOI:10.1038/s41467-023-36883-5
・Molecular mechanism on forcible ejection of ATPase inhibitory factor 1 from mitochondrial ATP synthase
R. Kobayashi, H. Ueno, K. I. Okazaki, *H. Noji, Nat. Commun., 14, 1682 (2023), DOI: 10.1038/s41467-023-37182-9
・Preference of CAMSAP3 for expanded microtubule lattice contributes to stabilization of the minus end
H. Liu, *T. Shima, Life Science Alliance, 6, e202201714 (2023), DOI: 10.26508/lsa.202201714
・Data Mining from XANES Spectra of Nickel Complexes for Structure Estimation
K. Fuku, *T. Yoshida, T. Sato, H. Iguchi, *S. Takaishi, R. Sakamoto, and H. Abe, Chem. Lett., 52, 289-291 (2023), DOI:10.1246/cl.230028
・Triptycene-Based Self-Assembled Monolayer as a Template for Successive Click Reactions
S. Das, F. Ishiwari, Y. Shoji, T. Fukushima, and *M. Zharnikov, J. Phys. Chem. C, 127, 5178–5185 (2023), DOI: 10.1021/acs.jpcc.3c00443
・Convergent evolution of animal and microbial rhodopsins
*K. Kojima, & *Y. Sudo, RSC Adv., 13, 5367-5381 (2022), DOI:10.1039/d3ra90016a
・Genetic Perturbation Alters Functional Substates in Alkaline Phosphatase
M. Sakuma, S. Honda, H. Ueno, K. V. Tabata, K. Miyazaki, N. Tokuriki, *H. Noji, J. Am. Chem. Soc., 145,2806-2814 (2023), DOI: 10.1021/jacs.2c06693
・Direct identification of the rotary angle of ATP cleavage in F1-ATPase from Bacillus PS3
*Y. Hasimoto, M. Sugawa, Y. Nishiguchi, F. Aeba, A. Tagawa, K. Suga, N. Tanaka, H. Ueno, H. Yamashita, R. Yokota, *T. Masaike, *T. Nishizaka, Biophys.J., 122, 554-564 (2023), DOI: 10.1016/j.bpj.2022.12.027
・Identification of a Functionally Efficient and Thermally Stable Outward Sodium-Pumping Rhodopsin (BeNaR) from a Thermophilic Bacterium
M. Kurihara, V. Thiel, H. Takahashi, K. Kojima, D. M. Ward, D. A. Bryant, M. Sakai, S. Yoshizawa, & *Y. Sudo, Chem. Pharm. Bull., 71, 154-164 (2023), DOI:10.1248/cpb.c22-00774
・Detection of membrane potential-dependent rhodopsin fluorescence using low-intensity light emitting diode for long-term imaging
S. Kawanishi, *K. Kojima, A. Shibukawa, M. Sakamoto, & *Y. Sudo, ACS Omega, 8,4826-4834 (2023), DOI:10.1021/acsomega.2c06980
・Surface Passivation of Lead Halide Perovskite Solar Cells by a Bifacial Donor–π–Donor Molecule
N. Minoi, *F. Ishiwari, K. Murotani, R. Nishikubo, T. Fukushima, and *A. Saeki, ACS Appl. Mater. Interfaces, 15, 6708–6715 (2023), DOI: 10.1021/acsami.2c18446
・Triptycene-Based Tripodal Self-Assembled Monolayer on Indium Tin Oxide
Saunak Das, F. Ishiwari, Y. Shoji, T. Fukushima, and *M. Zharnikov, J. Phys. Chem. C, , 127, 2088–2097 (2023), DOI: 10.1021/acs.jpcc.2c08390
・Topological Entrapment of Macromolecules During the Formation of Metal–Organic Framework
N. Mizutani, *N. Hosono, *T. Uemura, Chem. Commun., 59, 1293–1296 (2023), DOI: 10.1039/D2CC06330A
・Supramolecular Recognition within a Nanosized “Buckytrap” that Exhibits Substantial Photoconductivity
S. Sen, F. Ishiwari, R. Kaur, M. Ishida, D. Ray, K. Kikuchi, T. Mori, *S. Bähring, V. M. Lynch, *A. Saeki, *D. M. Guldi, *J. L. Sessler, and *A. Jana, , J. Am. Chem. Soc., 145, 1031-1039 (2023), DOI: 10.1021/jacs.2c10555
・Engineering Gas Separation Property of Metal–Organic Framework Membranes via Polymer Insertion
H. L. Hung, T. Iizuka, X. Deng, Q. Lyu, C. H. Hsu, N. Oe, *L. C. Lin, *N. Hosono, *D. Y. Kang, Sep. Purif. Technol., 310, 123115 (2023), DOI: 10.1016/j.seppur.2023.123115
・Overcoming the Entropy of Polymer Chains by Making a Plane with Terminal Groups: A Thermoplastic PDMS with a Long-Range 1D Structural Order
Y. Chen, *F. Ishiwari, T. Fukui, T. Kajitani, H. Liu, X. Liang, K. Nakajima, M. Tokita, and *T. Fukushima, Chem. Sci., ,14, 2431–2440 (2023), DOI: 10.1039/D2SC05491D
・Metal-dependent base pairing of bifacial iminodiacetic acid-modified uracil bases for switching DNA hybridization partner
K. Mori, *Y. Takezawa, *M. Shionoya, Chem. Sci., ,14, 1082–1088 (2023), DOI: 10.1039/D2SC06534G
・Thermodynamic Control of Intramolecular Singlet Fission and Exciton Transport in Linear Tetracene Oligomers
S. Nakamura, H. Sakai, M. Fuki, R. Ooie, F. Ishiwari, A. Saeki, *N. V. Tkachenko, *Y. Kobori, and *T. Hasobe, Angew. Chem. Int. Ed., 62, e202217704 (2023), DOI: 10.1002/anie.202217704
・Motor generated torque drives coupled yawing and orbital rotations of kinesin coated gold nanorods
M. Sugawa, Y, Maruyama, M. Yamagishi, R. A. Cross, *J. Yajima, Commun Biol.,5, 1368 (2022), DOI:10.1038/s42003-022-04304-w
・Structural Elements Involved in ATP Hydrolysis Inhibition and ATP Synthesis of Tuberculosis and Nontuberculous Mycobacterial F-ATP Synthase Decipher New Targets for Inhibitors
C. F. Wong, W. G. Saw, S. Basak, M. Sano, H Ueno, H. W. Kerk, D. Litty, P. Ragunathan, T. Dick, V. Müller, H. Noji, *G. Grüber, Antimicrob Agents Chemother.,66, e0105622 (2022), DOI: 10.1128/aac.01056-22
・CuII-mediated DNA base pairing of a triazole-4-carboxylate nucleoside prepared by click chemistry
L. Hu, *Y. Takezawa, *M. Shionoya, Chem. Commun. ,59, 892–895 (2023), DOI: 10.1039/d2cc06205d
・Single-Molecule Observation of Redox Reactions Enabled by Rigid and Isolated Tripodal Molecules
Y. Kobayashi, *Y. Yokota, R. A. Wong, M. Hong, J. Takeya, S. Osawa, F. Ishiwari, Y. Shoji, T. Harimoto, K. Sugimoto, Y. Ishigaki, *T. Suzuki, *T. Fukushima, and *Y. Kim, J. Phys. Chem. C, 127, 746 -758 (2023), DOI: 10.1021/acs.jpcc.2c07362
・3,11-Diaminodibenzo[a,j]phenazine: Synthesis, Properties, and Applications to Tröger’s Base-Forming Ladder Polymerization
S. Izumi, K. Inoue, Y. Nitta, T. Enjou, T. Ami, K. Oka, *N. Tohnai, S. Minakata, T. Fukushima, *F. Ishiwari, and *Y. Takeda, Chem. Eur. J., 29, e202202702 (2023), DOI: 10.1002/chem.202202702
・CuII-mediated stabilisation of DNA duplexes bearing consecutive ethenoadenine lesions and its application to a metal-responsive DNAzyme
S. C. Rajasree, *Y. Takezawa, *M. Shionoya, Chem. Commun. , 59, 1006–1009 (2023), DOI: 10.1039/d2cc06179a
・Fission yeast Dis1 is an unconventional TOG/XMAP215 that induces microtubule catastrophe to drive chromosome pulling
, Y. Murase, M. Yamagishi, N. Okada, M. Toya, J. Yajima, T. Hamada, M. Sato, Commun Biol., 5, 1298 (2022), DOI: 10.1038/s42003-022-04271-2
・Rotaxanes with Dynamic Mechanical Chirality: Systematic Studies on Synthesis, Enantiomer Separation, Racemization, and Chiral-Prochiral Interconversion
*F. Ishiwari and *T. Takata, Front. Chem., 10, 1025977 (2022), DOI: 10.3389/fchem.2022.1025977
・Coordination-driven Synthesis of a Self-assembled Architecture Bearing Urea Groups from a Triply Helical Fe(II) Complex of a Tripodal Ligand and a Pd(II) Complex
Y. Chiba, H. Fujii, T. Nakamura, *T. Nabeshima, Chem. Lett.,51, 1128 -1130 (2022), DOI: 10.1246/cl.220408
・Rotaxane formation by an allosteric pseudomacrocyclic anion receptor utilising kinetically labile copper(i) coordination properties
T. Aizawa, S. Akine, T. Saiki, T. Nakamura, *T. Nabeshima, Dalton Trans., 51, 17277-17282 (2022), DOI: 10.1039/D2DT03331C
・Direct observation of stepping rotation of V-ATPase reveals rigid component in coupling between Vo and V1 motors
A. Otomo, T. Iida, Y. Okuni, H. Ueno, T. Murata, R. Iino*, Proc Natl Acad Sci U S A., 119, e2210204119 (2022), DOI: 10.1073/pnas.2210204119
・Effects of Ammonium and Alkali Metal Additives on Anisotropic Photoconductivities and Solar Cell Efficiencies of Two-Dimensional Lead Halide Perovskites
R. Shimono, R. Nishikubo, F. Ishiwari, and *A. Saeki, J. Phys. Chem. C, 126, 17894-17903 (2022), DOI: 10.1021/acs.jpcc.2c06285
・Mutations conferring SO42− pumping ability on the cyanobacterial anion pump rhodopsin and the resultant unique features of the mutant
Y. Doi, J. Watanabe, R. Nii, T. Tsukamoto, M. Demura, Y. Sudo, & *T. Kikukawa, Sci. Rep., 12, 16422 (2022), DOI:10.1038/s41598-022-20784-6
・Anchoring geometry is a significant factor in determining the direction of kinesin-14 motility on microtubules
M. Yamagishi, R. Sumiyoshi, D. R. Drummond, *J. Yajima, Sci Rep.,12, 15417 (2022), DOI: 10.1038/s41598-022-19589-4
・Enzyme-based digital bioassay technology - key strategies and future perspectives
*H. Noji, Y. Minagawa, H. Ueno, Lab on a Chip,22, 3092-3109 (2022), DOI: 10.1039/d2lc00223j
・An Iron(II) Complex of a Tripodal 2,2′-Bipyridine with Perfluoroalkyl Linkers Showing Anion-dependent fac/mer Isomer Ratio
Y. Chiba, Z. Jin, T. Nakamura, *T. Nabeshima, Chem. Lett., 51, 1018-1021 (2022), DOI: 10.1246/cl.220314
・Rational peptide design for regulating liquid-liquid phase separation on the basis of residue-residue contact energy
*K. Kamagata, M. Ariefai, H. Takahashi, A. Hando, D. R. G. Subekti, K. Ikeda, A. Hirano, T. Kameda, Sci. Rep., 12, 13718 (2022), DOI: 10.1038/s41598-022-17829-1
・Torque generating properties of Tetrahymena ciliary three-headed outer-arm dynein
S. Yamaguchi, M. Yamagishi, *J. Yajima, Sci Rep., 12, 16722 (2022), DOI: 10.1038/s41598-022-21001-0
・Toughening and stabilizing MOF crystals via polymeric guest inclusion
T. Iizuka, N. Hosono, *T. Uemura, Dalton Trans., 51, 13204–13209 (2022), DOI 10.1039/D2DT01425D
・Synthesis and electrocatalysis of ordered carbonaceous frameworks from Ni porphyrin with four ethynyl groups
K. Chida, *T. Yoshii, M. Ohwada, Y. Hayasaka, J. Komeda, R. Sakamoto, J. Maruyama, K. Kamiya, M. Inoue, F. Tani, *H. Nishihara, Catal. Today, 411–412, 113830 (2023), DOI:10.1016/j.cattod.2022.06.045
・Improved Predictions of Organic Photovoltaic Performance through Machine Learning Models Empowered by Artificially Generated Failure Data
Y. Miyake, K. Kranthiraja, F. Ishiwari, and *A. Saeki, Chem. Mater., 34, 6912-6920 (2022), DOI: 10.1021/acs.chemmater.2c01294,
・Giant Carbon Nano-Test Tubes as Versatile Imaging Vessels for High-Resolution and In Situ Observation of Proteins
T. T. Chuong, T. Ogura, N. Hiyoshi, K. Takahashi, S. Lee, K. Hiraga, H. Iwase, A. Yamaguchi, K. Kamagata, E. Mano, S. Hamakawa, H. Nishihara, T. Kyotani, G. D. Stucky, *T. Itoh, ACS Appl. Mater. Interfaces, 14, 26507-26516 (2022), DOI: 10.1021/acsami.2c06318
・Exploration of Charge Transport Materials to Improve the Radiation Tolerance of Lead Halide Perovskite Solar Cells
Y. Murakami, R. Nishikubo, F. Ishiwari, K. Okamoto, T. Kozawa, and *A. Saeki, Mater. Adv., 3, 4861-4869 (2022), DOI: 10.1039/d2ma00385f
・Multivariate Analysis of Mixed Ternary and Quaternary A-Site Organic Cations in Tin Iodide Perovskite Solar Cells
E. Nakanishi, R. Nishikubo, F. Ishiwari, T. Nakamura, A. Wakamiya, and *A. Saeki, ACS Materials Lett., 4, 1124-1131 (2022), DOI: 10.1021/acsmaterialslett.2c00229
・How Does F1-ATPase Generate Torque?: Analysis From Cryo-Electron Microscopy and Rotational Catalysis of Thermophilic F1
, *H. Noji, H. Ueno, Front Microbiol, 13, 904084 (2022), DOI: 10.3389/fmicb.2022.904084
・Structure-dependent recruitment and diffusion of guest proteins in liquid droplets of FUS
*K. Kamagata, N. Iwaki, S. Kanbayashi, T. Banerjee, R. Chiba, V. Gaudon, B. Castaing, S. Sakomoto, Sci. Rep., 12, 7101 (2022). DOI: 10.1038/s41598-022-11177-w
・“Combinatorial Exploration of Monovalent Metals (M, M’) in Alkali, 11th-, and 13th-Group Elements toward (M/M’)–(Bi/Sb)–I Solar Cells
C. Nishikawa, R. Nishikubo, F. Ishiwari, and *A. Saeki, ACS Appl. Energy Mater., 5, 6291-6301 (2022), DOI:10.1021/acsaem.2c00651
・Two-Dimensional Metal–Organic Framework Acts as a Hydrogen Evolution Cocatalyst for Overall Photocatalytic Water Splitting
J. Guan, T. Pal, K. Kamiya, N. Fukui, H. Maeda, T. Sato, H. Suzuki, O. Tomita, H. Nishihara, *R. Abe, and *R. Sakamoto, ACS Catal., 12, 3881–3889 (2022), DOI: 10.1021/acscatal.1c05889
・Mixed Metal–Organic Framework Stationary Phases for Liquid Chromatography
K. Kioka, N. Mizutani, *N. Hosono, *T. Uemura, ACS Nano, 16, 6771-6780 (2022), DOI: 10.1021/acsnano.2c01592
・Phototriggered apoptotic cell death (PTA) Using the light-driven outward proton pump rhodopsin archaerhodopsin 3
S. Nakao, K. Kojima, & *Y. Sudo, J. Am. Chem. Soc., 144, 3771-3775 (2022), DOI: 10.1021/jacs.1c12608
・Activation of positive cooperativity by size-mismatch assembly via inclination of guests in a single-site receptor
T. Matsuno, K. Takahashi, K. Ikemoto, *H. Isobe, Chemistry An Asian Journal, published online (2022), DOI: 10.1002/asia.202200076
・Development of an outward proton pumping rhodopsin with a new record in thermostability by means of amino-acid mutations
S. Yasuda, T. Akiyama, K. Kojima, T. Ueta, T. Hayashi, S. Ogasawara, S. Nagatoishi, K.Tsumoto, N. Kunishima, Y. Sudo, *M. Kinoshita, & *T. Murata, J. Phys. Chem. B, 126, 1004-1015 (2022), DOI:10.1021/acs.jpcb.1c08684
・Manipulation of charge carrier flow in Bi4NbO8Cl nanoplate photocatalyst with metal loading
K. Ogawa, R. Sakamoto, C. Zhong, H. Suzuki, K. Kato, O. Tomita, K. Nakashima, A. Yamakata, T. Tachikawa, A. Saeki, *H. Kageyama, *R. Abe, Chem. Sci., 13, 3118-3128(2022), DOI: 10.1039/d1sc06054f
・Proton transfer pathway in anion channelrhodopsin-1
M. Tsujimura, K. Kojima, S. Kawanishi, *Y. Sudo, *H. Ishikita, eLife, 10, e72264(2021) DOI: 10.7554/eLife.72264
・Exploring the retinal binding cavity of archaerhodopsin-3 by replacing the retinal chromophore with a dimethyl phenylated derivative
T. Tsuneishi, M. Takahashi, M. Tsujimura, K. Kojima, H. Ishikita, Y. Takeuchi, *Y. Sudo, Front. Mol. Biosci., 8, 794948 (2021), DOI:10.3389/fmolb.2021.794948
・De novo design of a nanopore for single-molecule detection that incorporates a β-hairpin peptide
K. Shimizu, B. Mijiddorj, M. Usami, I. Mizoguchi, S. Yoshida, S. Akayama, Y. Hamada, A. Ohyama, K. Usui, I. Kawamura, *R. Kawano, Nature Nanotechnology, 17,67-75(2022), DOI:10.1038/s41565-021-01008-w
・Introduction of Triptycene with a Particular Substitution Pattern into Polymer Chains Can Dramatically Improve the Structural and Rheological Properties
*F. Ishiwari, G. Okabe, T. Kajitani, and *T. Fukushima, ACS Macro Lett., 10,1529(2021), DOI:10.1021/acsmacrolett.1c00660
・Three-dimensional tracking of the ciliate Tetrahymena reveals the mechanism of ciliary stroke-driven helical swimming.
A. Marumo, M. Yamagishi, *J. Yajima, Commun. Biol., 4,1209(2021), DOI:10.1038/s42003-021-02756-0
・Bipyridine-Modified DNA Three-Way Junctions with Amide Linkers: Metal-Dependent Structure Induction and Self-Sorting
*Y. Takezawa, S. Sakakibara, *M. Shionoya, Chem. Eur. J., 67,16626–16633 (2021), DOI:10.1002/chem.202102977
・An optogenetic assay method for electrogenic transporters using Escherichia coli co-expressing light-driven proton pump
M. Hayashi, K. Kojima, *Y. Sudo, & *A. Yamashita, Protein Sci., 30,2161-2169(2021), DOI:10.1002/pro.4154
・Microbial rhodopsins as multi-functional photoreactive membrane proteins for optogenetics
S. Nakao, K. Kojima, & *Y. Sudo, Biol Pharm. Bull., 44,1357-1363 (2021), DOI:10.1248/bpb.b21-00544
・Molecular principles of recruitment and dynamics of guest proteins in liquid droplets
*K. Kamagata, N. Iwaki, M. K. Hazra, S. Kanbayashi, T. Banerjee, R. Chiba, S. Sakomoto, V. Gaudon, B. Castaing, H. Takahashi, M. Kimura, H. Oikawa, S. Takahashi, Y. Levy, Sci. Rep.,11,19323 (2021) (2021), DOI:10.1038/s41598-021-98955-0
・Synthesis and chiral resolution of twisted carbon nanobelts
W. Fan, T. Matsuno, Y. Han, X. Wang, Q. Zhou, *H. Isobe, *J. Wu, Journal of the American Chemical Society,143,15924-15929 (2021), DOI:10.1021/jacs.1c08468
・Simple Fabrication of Solid-State Nanopores on a Carbon Film
N. Takai, K. Shoji, T. Maki, R. Kawano, Micromachines,12,1135 (2021), DOI: 10.3390/mi12091135
・A hybrid molecular peapod of sp2- and sp3-nanocarbons enabling ultrafast terahertz rotations
*T. Matsuno, S. Terasaki, K. Kogashi, R. Katsuno, *H. Isobe, Nat. Commun.,12,5062 (2021), DOI: 10.1038/s41467-021-25358-0
・Amplification of over 100 kbp DNA from Single Template Molecules in Femtoliter Droplets
H. Ueno, H. Sawada, N. Soga, M. Sano, S. Nara, K. V. Tabata, M. Su’etsugu, *H. Noji, ACS Synth. Biol.,10,2179-2186 (2021), DOI:10.1021/acssynbio.0c00584
・Revisiting Molecular Adsorption: Unconventional Uptake of Polymer Chains from Solution into Sub-Nanoporous Media
N. Oe, *N. Hosono, *T. Uemura, Chem. Sci.,12,12576–12586 (2021), DOI:10.1039/D1SC03770F
・Evidence of C–F···H–C Attractive Interaction: Enforced Coplanarity of a Tetrafluorophenylene-Ethynylene-Linked Porphyrin Dimer
*M. Morisue, M. Kawanishi, I. Ueno, T. Nakamura, T. Nabeshima, K. Imamura, and K. Nozaki, J. Phys. Chem. B,125,9286 (2021), DOI:10.1021/acs.jpcb.1c04504
・Structure of a retinal chromophore of dark-adapted middle rhodopsin as studied by solid-state nuclear magnetic resonance spectroscopy
I. Kawamura, H. Seki, S. Tajima, Y. Makino, A. Shigeta, T. Okitsu, A. Wada, A. Naito, & Y. Sudo, Biophys. Physicobiol.,18,177-185 (2021), DOI:10.2142/biophysico.bppb-v18.019
・Testing mechanisms of DNA sliding by architectural DNA binding proteins: dynamics of single wild-type and mutant protein molecules in vitro and in vivo
*K. Kamagata, Y. Itoh, C. Tan, E. Mano, Y. Wu, Sridhar Mandali, S. Takada, *R. C. Johnson, Nucleic Acids Research,49,8642-8664 (2021), DOI:10.1093/nar/gkab658
・The six steps of the complete F1-ATPase rotary catalytic cycle
M. Sobti, H. Ueno, H. Noji, A. G. Stewart, Nat. Commun.,12,4690 (2021), DOI:10.1038/s41467-021-25029-0
・Functional expression of the eukaryotic proton pump rhodopsin OmR2 in Escherichia coli and its photochemical characterization
M. Kikuchi, K. Kojima, S. Nakao, S. Yoshizawa, S. Kawanishi, A. Shibukawa, T. Kikukawa, & *Y. Sudo, Sci. Rep.,11, 14756 (2021), DOI:10.1038/s41598-021-94181-w
・Ultralong π-Conjugated Bis(terpyridine)metal Polymer Wires Covalently Bound to a Carbon Electrode: Fast Redox Conduction and Redox Diode Characteristics
KH. Wu, *R. Sakamoto, H. Maeda, E. Jia, H. Phua, *H. Nishihara, Molecules,26, 4267 (2021), DOI:10.3390/molecules26144267
・Engineering of the genome editing protein Cas9 to slide along DNA
T. Banerjee, H. Takahashi, D. Rendra G. Subekti, *K. Kamagata, Sci. Rep.,11, 14165 (2021), DOI:10.1038/s41598-021-93685-9
・Manipulations of chiroptical properties in belt-persistent cycloarylenes via desymmetrization with heteroatom doping
T. M Fukunaga, C. Sawabe, T. Matsuno, J. Takeya, T. Okamoto,*H. Isobe, Angewandte Chemie International Edition,60, 19097-19101 (2021), DOI:10.1002/anie.202106992
・Characterization of the motility of monomeric kinesin-5/Cin8.
M. Yamagishi, Y. Maruyama, M. Sugawa, *J. Yajima, Biochem Biophys Res Commun.,555, 115-120 (2021), DOI:10.1016/j.bbrc.2021.03.134
・Layered Perovskite Oxyiodide with Narrow Band Gap and Long Lifetime Carriers for Water Splitting Photocatalysis
K. Ogawa, H. Suzuki, C. Zhong, R. Sakamoto, O. Tomita, A. Saeki, H. Kageyama,*R. Abe, J. Am. Chem. Soc.,143, 8446–8453 (2021), DOI:10.1021/jacs.1c02763
・Elucidation and control of low and high active populations of alkaline phosphatase molecules for quantitative digital bioassay
H. Ueno, M. Kato ,Y. Minagawa, Y, Hirose, *H. Noji, Protein Science,30,1628-1639(2021), DOI:10.1002/pro.4102
・Earth-abundant iron(iii) species serves as a cocatalyst boosting the multi-electron reduction of IO3−/I− redox shuttle in Z-scheme photocatalytic water splitting
K. Murofushi, K. Ogawa, H. Suzuki, R. Sakamoto, O. Tomita, K. Kato, A Yamakata, A. Saeki, *R. Abe, J. Mater. Chem. A,9,11718-11725(2021), DOI: 10.1039/d1ta01703a
・Exclusive formation of a meridional complex of a tripodand and perfect suppression of guest recognition
H. Morita, S. Akine, T. Nakamura, *T. Nabeshima, Chem. Sci.,12,7720 (2021), DOI: 10.1039/D1SC01529J
・Metal-mediated DNA base pairing of easily prepared 2-oxo-imidazole-4-carboxylate nucleotides
L. Hu, *Y. Takezawa, *M. Shionoya, Chem. Sci.,13,3977-3983 (2022), DOI: 10.1039/d2sc00926a
・Metal‐Organic Frameworks for Practical Separation of Cyclic and Linear Polymers
T. Sawayama, Y. Wang, T. Watanabe, M. Takayanagi, T. Yamamoto, *N. Hosono, *T. Uemura, Angew. Chem. Int. Ed.,60,11830-11834 (2021), DOI: 10.1002/anie.202102794
・Stereoselectivity in spontaneous assembly of rolled incommensurate carbon bilayers
T. Matsuno, Y. Ohtomo, M. Someya & H. Isobe, Nature Communications,12,1575 (2021), DOI: 10.1038/s41467-021-21889-8
・Kinetic analysis of the inhibition mechanism of bovine mitochondrial F1-ATPase inhibitory protein using biochemical assay
R. Kobayashi, S. Mori, H. Ueno, *H. Noji, J. Biochem.,170,79-87 (2021),DOI:10.1093/jb/mvab022
・Further thermo-stabilization of thermophilic rhodopsin from Thermus thermophilus JL-18 through engineering in extramembrane regions
T. Akiyama, *N. Kunishima, S. Nemoto, K. Kazama, M. Hirose, Y. Sudo, Y. Matsuura, H. Naitow, & *T. Murata, Proteins,89,301-310 (2021),DOI:10.1002/prot.26015
・Synthesis, band structure and photocatalytic property of Sillén−Aurivillius oxychlorides BaBi5Ti3O14Cl, Ba2Bi5Ti4O17Cl and Ba3Bi5Ti5O20Cl with triple-, quadruple- and quintuple-perovskite layers
D. Ozaki, H. Suzuki, K. Ogawa, R. Sakamoto, Y. Inaguma, K. Nakashima, O. Tomita, H. Kageyama, *Ryu Abe, J. Mater. Chem. A,9,8332-8340 (2021),DOI:10.1039/D0TA12550D
・Fused quinoidal dithiophene‐based helicenes: Synthesis by intramolecular radical-radical coupling reactions and dynamics of interconversion of enantiomers
G. Li, T. Matsuno, Y. Han, S. Wu, Y. Zou, Q. Jiang, *H. Isobe, *Jishan Wu, Angew. Chem. Int. Ed.,60,10326-10333 (2021),DOI:10.1002/anie.202100606
・CYK4 relaxes the bias in the off-axis motion by MKLP1 kinesin-6
Y. Maruyama, M. Sugawa, S. Yamaguchi, T. Davies, T. Osaki, M. Yamagishi, S. Takeuchi, *M. Mishima & *J. Yajima, Commun. Biol.,4,180 (2021),DOI:10.1038/s42003-021-01704-2
・Crystal Flexibility Design through Local and Global Motility Cooperation
P. Wang , *K. Otake, N. Hosono, *S. Kitagawa, Angew. Chem. Int. Ed.,60,7030–7035 (2021),DOI:10.1002/anie.202015257
・Bacterium lacking a known gene for retinal biosynthesis possesses functional rhodopsins
Y. Nakajima, K. Kojima, Y. Kashiyama, S. Doi, R. Nakai, Y. Sudo, K. Kogure, & *S. Yoshizawa, Microbes and Environments,,35,ME20085 (2020),DOI:10.1264/jsme2.ME20085
・Lokiarchaeota archaeon Schizorhodopsin-2 (LaSzR2) is an inward proton pump displaying a characteristic feature of acid-induced spectral blue-shift
K. Kojima, S. Yoshizawa, M. Hasegawa, M. Nakama, M. Kurihara, T. Kikukawa, & *Y. Sudo Sci. Rep.,10,20857 (2020),DOI:10.1038/s41598-020-77936-9
・The 3×120º rotary mechanism of Paracoccus denitrificans F1-ATPase is different from that of the bacterial and mitochondrial F1-ATPases
*M. Zarco- Zavala, R. Watanabe, D. G. G. McMillan, T. Suzuki, H. Ueno, F. Mendoza-Hoffmann,*J. J. García-Trejo, *H. Noji Proc Natl Acad Sci U S A.,14,1760-1770 (2020),DOI:10.1021/acsnano.0c06981
・Analytical Model for Particle Capture in Nanopores Elucidates Competition among Electrophoresis, Electroosmosis, and Dielectrophoresis
*M. Chinappi, M. Yamaji, R. Kawano, and *F. Cecconi,ACS Nano,14,1760-1770 (2020),DOI:10.1021/acsnano.0c06981
・Applicability of styrene-maleic acid copolymer for two microbial rhodopsins, RxR and HsSRI
T. Ueta, K. Kojima, T. Hino, M. Shibata, S. Nagano, & *Y. Sudo,Biophys. J.,119,1760-1770 (2020),DOI:10.1016/j.bpj.2020.09.026
・A case study of stereoisomerism with [6]cyclo[4]helicenylene
T. Matsuno, Y. Yang, Y. Nanjo, *H. Isobe, *S. Sato, Chem. Lett.,50110-112,DOI:10.1246/cl.200717
・A unique clade of light‑driven proton‑pumping rhodopsins evolved in the cyanobacterial lineage
M. Hasegawa, T. Hosaka, K. Kojima, Y. Nishimura, Y. Nakajima, T. Kimura-Someya, M. Shirouzu, Y. Sudo, & *S. Yoshizawa,Sci. Rep.,1016752 (2020),DOI:10.1038/s41598-020-73606-y
・In vitro reconstitution of Dynein force exertion in a bulk viscous medium
H. Palenzuela, B. Lacroix, J. Salle, K. Minami, T. Shima, A. Jegou, *G. Romet-Lemonne, *N. Minc Currt Biol.,30,4534-4540.e7 (2020),DOI:10.1016/j.cub.2020.08.078
・Modeling a Microtubule Filaments Mesh Structure from Confocal Microscopy Imaging
*Y. Ueno, K. Matsuda, K. Katoh, A. Kuzuya, A. Kakugo, A. Konagaya Micromachines,11, 3844 (2020),DOI:10.3390/mi11090844
・Crystalline naphthylene macrocycles capturing gaseous small molecules in chiral nanopores
T. Matsuno, K. Fukunaga, S. Kobayashi, P. Sarkar, S. Sato, T. Ikeda, *H. Isobe Chem. Asian J.,15, 3829-3835 (2020),DOI:10.1002/asia.202000876
・Metal–Organic Frameworks for Macromolecular Recognition and Separation
*N. Hosono, *T. Uemura, Matter ,3, 652–663 (2020),DOI:10.1016/j.matt.2020.06.013
・The N‐terminal β‐strand of single‐headed kinesin‐1 can modulate the off‐axis force‐generation and resultant rotation pitch
M. Yamagishi, S. Fujimura, M. Sugawa, T. Nishizaka, *J. Yajima, Cytoskeleton ,77,351-361 (2020),DOI:10.1002/cm.21630
・Analysis of Membrane Protein Deinsertion-Associated Currents with Nanoneedle-Supported Bilayers to Discover Pore Formation Mechanisms
*K. Shoji, R. Kawano, and *R. J. White, Langmuir. ,36,10012-10021 (2020),DOI:10.1021/acs.langmuir.0c00833
・Comparative studies of the fluorescence properties of microbial rhodopsins: Spontaneous emission versus photo-intermediate fluorescence
K. Kojima, R. Kurihara, M. Sakamoto, T. Takanashi, H. Kuramochi, X. M. Zhang, H. Bito, T. Tahara, & *Y. Sudo, J. Phys. Chem. B ,124,7361-7367 (2020),DOI:10.1021/acs.jpcb.0c06560
・Green-sensitive, long-lived, step-functional anion channelrhodopsin-2 variant as a high-potential neural silencing tool
K. Kojima, N. Miyoshi, A. Shibukawa, S. Chowdhury, M. Tsujimura, T. Noji, H. Ishikita, A. Yamanaka, & *Y. Sudo, J. Phys. Chem. Lett. ,11,6214-6218 (2020),DOI:10.1021/acs.jpclett.0c01406
・Unimolecularly Thick Monosheets of Vinyl Polymers Fabricated in Metal–Organic Frameworks
N. Hosono, S. Mochizuki, Y. Hayashi, *T. Uemura, Nat. Commun. ,11,3573 (2020),DOI:10.1038/s41467-020-17392-1
・Tight chemomechanical coupling of the F1 motor relies on structural stability
M. Tanaka, T. Kawakami, T. Okaniwa, Y. Nakayama, S. Toyabe, *H. Ueno, *E. Muneyuki, Biophys. J. ,119,48-54(2020),DOI:10.1016/j.bpj.2020.04.039
・Recessed Ag/AgCl Microelectrode-Supported Lipid Bilayer for Nanopore Sensing
*K. Shoji, R. Kawano, and *R. J. White, Analytical Chemistry ,92,10856-10862 (2020), DOI: 10.1021/acs.analchem.0c02720
・Ineffective OH-pinning of the flipping dynamics of a spherical guest within a tight-fitting tube
*T. Matsuno, M. Someya, S. Sato, S. Maeda, Angew. Chem. Int. Ed. ,59,14570-14576 (2020), DOI: 10.1002/anie.202005538
・Structural Deformation Energy Modulation Strategy in a Soft Porous Coordination Polymer with Interpenetrated Framework
Y. Gu, J. J. Zheng, K. Otake, K. Sugimoto, N. Hosono, S. Sakaki, *F. Li, *S. Kitagawa, Angew. Chem. Int. Ed. ,59,15517-15521(2020), DOI: 10.1002/anie.202003186
・How Cytoplasmic Dynein Couples ATP Hydrolysis Cycle to Diverse Stepping Motions: Kinetic Modeling
S. Kubo, T. Shima, *S. Takada, Biophys. J. ,118,1930-1945 (2020), DOI: 10.1016/j.bpj.2020.03.012
・Dynamic behavior of an artificial protein needle contacting a membrane observed by high-speed atomic force microscopy
*T. Ueno, K. Niwase, D. Tsubokawa, K. Kikuchi, N. Takai, T. Furuta, R. Kawano, T. Uchihashi, Nanoscale, 12, 8166-8173 (2020), DOI: 10.1039/D0NR01121E
・Methodology for further thermostabilization of an intrinsically thermostable membrane protein using amino-acid mutations with its original function being retained?
S. Yasuda, T. Akiyama, S. Nemoto, T. Hayashi, T. Ueta, K. Kojima, T. Tsukamoto, S. Nagatoishi, K. Tsumoto, Y. Sudo, *M. Kinoshita, & *T. Murata, J. Chem. Inf. Model., 60, 1709-1716 (2020), DOI: 10.1021/acs.jcim.0c00063
・‘Click’ conjugated porous polymer nanofilm with a large domain size created by a liquid/liquid interfacial protocol
J. Komeda, R. Shiotsuki, A. Rapakousiou, *R. Sakamoto, R. Toyoda, K. Iwase, M. Tsuji, K. Kamiya, H. Nishihara, Chem. Commun., 56, 3677-3680 (2020), DOI: 10.1039/D0CC00360C
・How Does a Microbial Rhodopsin RxR Realize Its Exceptionally High Thermostability with the Proton-Pumping Function Being Retained?
T. Hayashi, S. Yasuda, K. Suzuki, T. Akiyama, K. Kanehara, K. Kojima, M. Tanabe, R. Kato, T. Senda, Y. Sudo, *T. Murata, & *M. Kinoshita, J. Phys. Chem. B, 124, 990-1000 (2020), DOI: 10.1021/acs.jpcb.9b10700
・Recognition of Polymer Terminus by Metal–Organic Frameworks Enabling Chromatographic Separation of Polymers
N. Mizutani, N. Hosono, B. L. Ouay, T. Kitao, R. Matsuura, T. Kubo, *T. Uemura, J. Am. Chem. Soc., 142, 3701–3705 (2020), DOI: 10.1021/jacs.9b13568
・Observation of an Exotic State of Water in the Hydrophilic Nanospace of Porous Coordination Polymers
*T. Ichii, T. Arikawa, K. Omoto, N. Hosono, H. Sato, S. Kitagawa, *K. Tanaka, Commun. Chem., 3, 16 (2020), DOI: 10.1038/s42004-020-0262-9
・Small stepping motion of processive dynein revealed by load-free high-speed single-particle tracking
J. Ando, T. Shima, R. Kanazawa, R. Shimo-Kon, A. Nakamura, M. Yamamoto, T. Kon and R. Iino,
Scientific Reports , 10, 1080(2020), DOI:10.1038/s41598-020-58070-y
・Rotary catalysis of bovine mitochondrial F1-ATPase studied by single-molecule experiments
R. Kobayashi, H. Ueno, C. B. Li, *H. Noji, Proc. Natl. Acad. Sci. USA., 117, 1447-1456 (2020), DOI:10.1073/pnas.1909407117
・Regioselective Chemical Modification of Cysteine Residues on Protein Surfaces Focusing on Local Environment around the Conjugation Site
T. Miyale, R. Tamaki, M. Asanuma, Y. Fukada, S. Hirota, *T. Matsuo, Bioconjugate Chem., 31, 794 (2020), DOI: 10.1021/acs.bioconjchem.9b00869
・Vectorial proton transport mechanism of RxR, a phylogenetically distinct and thermally stable microbial rhodopsin
K. Kojima, T. Ueta, T. Noji, K. Saito, K. Kanehara, S. Yoshizawa, H. Ishikita & *Y. Sudo, Sci. Rep., 10, 282 (2020), DOI:10.1038/s41598-019-57122-2
・Visualizing dynamic actin cross-linking processes driven by the actin-binding protein anillin
K. Matsuda, M. Sugawa, M. Yamagishi, *N. Kodera, *J. Yajima, FEBS Letters, 594, 1237-1247, DOI: 10.1002/1873-3468.13720
・Porphyrin-Based Probe for Simultaneous Detection of Interface Acidity and Polarity during Lipid-Phase Transition of Vesicles
R. Majumder, S. Roy, K. Okamoto, S. Nagao, *T. Matsuo, *P. P. Parui, Langmuir, 36, 426 (2020), DOI: 10.1021/acs.langmuir.9b02781
・Regulated single‐axis rotations of a carbonaceous guest in a van der Waals complex with an entropy cost
T. Matsuno, Y. Nakai, Y. Maniwa, M. Someya, S. Sato, *H. Isobe, Chemistry An Asian Journal, 15, 273-278 (2020), DOI: 10.1002/asia.201901638
・Pseudo Gated Adsorption with Negligible Volume Change Evoked by Halogen Bond Interaction in the Nanospace of MOFs
P. Kanoo, R.Matsuda,*H. Sato, L. Li, N. Hosono, S. Kitagawa, Chem. Eur. J., 26, 2148–2153 (2020), DOI: 10.1002/chem.201904703
・Application of High-Sensitivity UV photoemission Spectroscopy to Examine the Electronic Structure of Thermophilic Rhodopsin
D. Sano, I. Ide, T. Akiyama, Y. Tanaka, Y. Sudo, T. Murata & H. Ishii, Mol. Crys. Liq. Crys., 687, 34-39 (2019), DOI: 10.1080/15421406.2019.1648052
・A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators
D. M. Needham, S. Yoshizawa, T. Hosaka, C. Poirier, C. J. Choi, E. Hehenberger, N. A. T. Irwin, S. Wilken, C. M. Yung, C. Bachy, R. Kurihara, Y. Nakajima, K. Kojima, T. Kimura-Someya, G. Leonard, R. R. Malmstrom, D. R. Mende, D. K. Olson, Y. Sudo, S. Sude, T. A. Richard, E. F. DeLong, P. J. Keeling, A. E. Santoro, M. Shirouzu, *W. Iwasaki, & *A. Z. Worden, Proc. Natl. Acad. Sci. USA, 116, 20574-20583 (2019), DOI: 10.1073/pnas.1907517116
・Tri‐ and Tetranuclear Metal‐String Complexes with Metallophilic d10–d10 Interactions
M. Olaru, J. F. Kögel, R. Aoki, R. Sakamoto, H. Nishihara, E. Lork, *S. Mebs, *M. Vogt, *J. Beckmann, Eur. J. Inorg. Chem., 26, 275-284 (2020), DOI: 10.1002/chem.201904106
・Application of DNA Quadruplex Hydrogels Prepared from Polyethylene Glycol-Oligodeoxynucleotide Conjugates to Cell Culture Media
S. Tanaka, S. Yukami, Y. Hachiro, *Y. Ohya, *A. Kuzuya, Polymers, 11, 1607 (2019), DOI: 10.3390/polym11101607
・Carbon Dioxide Capture and Efficient Fixation in a Dynamic Porous Coordination Polymer
Pengyan Wu, Y. Li, J. J. Zheng, N. Hosono, J. Wang, * K. Otake, Y. Liu, L. Xia, M. Jiang, S. Sakaki, *S. Kitagawa, Nat. Commun. , 10, 4362 (2019), DOI:10.1038/s41467-019-12414-z
・Single-molecule analysis reveals rotational substeps and chemo-mechanical coupling scheme of
Enterococcus hirae V1-ATPase
T. Iida, Y. Minagawa, H. Ueno, F. Kawai, T. Murata and *R. Iino,
J. Biol. Chem. (2019), DOI:10.1074/jbc.RA119.008947
・Accurate high-throughput screening based on digital protein synthesis in a massively parallel femtoliter droplet array
*Y. Zhang, Y. Minagawa, H. Kizoe, K. Miyazaki, R. Iino, H. Ueno, K. Tabata, Y. Shimane, *H. Noji, Sci. Adv., 5, eaav8185 (2019), DOI: 10.1126/sciadv.aav8185
・Electrophysiological Analysis of Antimicrobial Peptides in Diverse Species
N. Saigo, K. Izumi, *R. Kawano, ACS Omega, 4, 13124-13130 (2019), DOI:10.1021/acsomega.9b01033
・Mobile imaging platform for digital influenza virus counting
Y. Minagawa, Y. Minagawa#, H. Ueno#, K. V. Tabata, *H. Noji (#equally contributed), Lab Chip , 19, 2678-2687 (2019), DOI:10.1039/C9LC00370C
・Retarded solid‐state rotations of an oval‐shaped guest in a deformed cylinder with CH–π arrays
T. Matsuno, K. Fukunaga, S. Sato, *H. Isobe, Angew. Chem. Int. Ed. , 58 , 12170-12174 (2019), DOI: 10.1002/anie.201907040
・Photochemical Characterization of a New Heliorhodopsin from the Gram-Negative Eubacterium Bellilinea caldifistulae (BcHeR) and Comparison with Heliorhodopsin-48C12
A. Shibukawa, K. Kojima, Y. Nakajima, Y. Nishimura, S. Yoshizawa, *Y. Sudo, Biochemistry , 58, 2934-2943(2019) , DOI:10.7554/eLife.44928.
・Electrochromic triphenylamine-based cobalt(II) complex nanosheets
Y. Liu, R. Sakamoto, *C. L. Ho, *H. Nishihara, *W.Y. Wong, J. Mater. Chem. C , 7, 9159-9166 (2019), DOI: 10.1039/c9tc02257k
・GABA neurons in the ventral tegmental area regulate non-rapid eye movement sleep in mice
S. Chowdhury, T. Matsubara, T. Miyazaki, D. Ono, N. Fukatsu, M. Abe, K. Sakimura, Y. Sudo, *A. Yamanaka, Elife , 8, e44928 (2019), DOI:10.7554/eLife.44928.
・Quantitation of the neural silencing activity of anion channelrhodopsins in Caenorhabditis elegans and their applicability for long-term illumination
T. Yamanashi, M. Maki, K. Kojima, A. Shibukawa, T. Tsukamoto, S. Chowdhury, A. Yamanaka, S. Takagi, *Y. Sudo, Sci Rep., 9, 7863 (2019), DOI:110.1038/s41598-019-44308-x.
・Microwave‐Assisted Hydrothermal Synthesis of [Al (OH)(1,4‐NDC)] Membranes with Superior Separation Performances
*Yi Liu, Akihiro Hori, Shinpei Kusaka, N. Hosono, M. Li, A. Guo, D. Du, Y. Li, W. Yang, Y. Ma, *R. Matsuda, Chem. Asian J., 14, 2072–2076 (2019), DOI: 10.1002/asia.201900152
・Artificial Smooth Muscle Model Composed of Hierarchically Ordered Microtubule Asters Mediated by DNA Origami Nanostructures
K. Matsuda, A. M. R. Kabir, N. Akamatsu, A. Saito, S. Ishikawa, Tsuyoshi Matsuyama, O. Ditzer, M. S. Islam, Y. Ohya, K. Sada, A. Konagaya, *A. Kuzuya, *A. Kakugo, Nano Letters, 19, 3933-3938 (2019), DOI: 10.1021/acs.nanolett.9b01201
・Interfacial transmetallation synthesis of a platinadithiolene nanosheet as a potential 2D topological insulator
T. Pal, S. Doi, H. Maeda, K. Wada, C. M. Tan, N. Fukui, R. Sakamoto, S. Tsuneyuki, S. Sasaki, *H. Nishihara, Chemical Science , 10, 5218-5225 (2019), DOI: 10.1039/C9SC01144G
書籍/総説・解説
・The Unlimited Potential of Microbial Rhodopsins as Optical Tools
K. Kojima, A. Shibukawa, & *Y. Sudo, Biochemistry, 59, 218-229 (2020), DOI: 10.1021/acs.biochem.9b00768
・Recent developments on creation of artificial metalloenzyme
*T. Matsuo, T. Miyake, S. Hirota, Tetrahedron Lett. (digest paper), 60, 151226 (2019), DOI: 10.1016/j.tetlet.2019.151226
・The Accelerating World of Graphdiynes
*R. Sakamoto, N. Fukui, H. Maeda, R. Matsuoka, R. Toyoda, *H. Nishihara, Advanced Materials , 31, 1804211 (2019), DOI: 10.1002/adma.201804211
(Selected as Inside Front Cover)
・「高分子重合により合成可能な2次元カーボン:グラフィジイン」, 坂本良太・西原 寛, 高分子, 68, 303-304 (2019)
・「分子性ナノシートの新展開」, 坂本良太・西原 寛, 化学と工業, 72, 344-346 (2019)
・「Handbook of Chemical Biology of Nucleic Acids」, N. Sugimoto (Eds)
“Metal Ion-Induced Changes in the Stability of DNA Duplexes”,*Y. Takezawa, *M. Shionoya, N. Sugimoto, Springer, (2023), ISBN:978-9811997754
・「Functional Nanomaterials. Synthesis, Properties and Applications」, W.-Y. Wong and Q. Dong (Eds)
“Metal complex nanosheets: preparation, property and application”, R. Sakamoto, 207–223, WILEY-VCH, (2022), ISBN: 978-3-527-34797-1
・「ポストグラフェン材料の創製と用途開発最前線」, 柚原 淳司 (Ed.)
“ジピリンナノシートによる高効率太陽電池セルの開発”, 坂本良太、米田丈, 448, エヌ・ティー・エス, (2020), ISBN: 978-4-8604-3657-5
・「Hybrid Metal-Organic Framework and Covalent Organic Framework Polymers」, Bo Wang (Ed.)
“Polymers in Metal-Organic Frameworks: Synthesis, Recognition, and Hybrid Materials”, B. L. Ouay, T. Kitao, N. Hosono, T. Uemura, RSC, (2020), ISBN: 978-183-91-6153-7
・「Make Life Visible」, Y. Toyama, A. Miyawaki, M. Nakamura, M. Jinzaki (Eds).
“Molecular dynamics revealed by single-molecule FRET measurement”, T. Shima, *S. Uemura, Springer Nature Publishing, , 37-65 (2019), ISBN: 978-981-48-0001-3
・「グラフェンから広がる二次元物質の新技術と応用」, 吾郷浩樹, 齋藤理一郎, “分子性ナノシートの精密合成およびその物性評価”, 坂本良太, 米田 丈, 479, エヌ・ティー・エス, (2019), ISBN: 978-4-8604-3663-6
・「Handbook of Dynein (Second Edition)」, Keiko Hirose (Ed.),
"Structural and Functional Analysis of Dynein Motor Domain"
Tomohiro Shima* and Takahide Kon, Jenny Stanford Publishing, (2019) 37-65, ISBN: 9789814800013
・The Unlimited Potential of Microbial Rhodopsins as Optical Tools
K. Kojima, A. Shibukawa, & *Y. Sudo, Biochemistry, 59, 218-229 (2020), DOI: 10.1021/acs.biochem.9b00768
・Recent developments on creation of artificial metalloenzyme
*T. Matsuo, T. Miyake, S. Hirota, Tetrahedron Lett. (digest paper), 60, 151226 (2019), DOI: 10.1016/j.tetlet.2019.151226
・The Accelerating World of Graphdiynes
*R. Sakamoto, N. Fukui, H. Maeda, R. Matsuoka, R. Toyoda, *H. Nishihara, Advanced Materials , 31, 1804211 (2019), DOI: 10.1002/adma.201804211
(Selected as Inside Front Cover)
・「高分子重合により合成可能な2次元カーボン:グラフィジイン」, 坂本良太・西原 寛, 高分子, 68, 303-304 (2019)
・「分子性ナノシートの新展開」, 坂本良太・西原 寛, 化学と工業, 72, 344-346 (2019)
・「Handbook of Chemical Biology of Nucleic Acids」, N. Sugimoto (Eds)
“Metal Ion-Induced Changes in the Stability of DNA Duplexes”,*Y. Takezawa, *M. Shionoya, N. Sugimoto, Springer, (2023), ISBN:978-9811997754
・「Functional Nanomaterials. Synthesis, Properties and Applications」, W.-Y. Wong and Q. Dong (Eds)
“Metal complex nanosheets: preparation, property and application”, R. Sakamoto, 207–223, WILEY-VCH, (2022), ISBN: 978-3-527-34797-1
・「ポストグラフェン材料の創製と用途開発最前線」, 柚原 淳司 (Ed.)
“ジピリンナノシートによる高効率太陽電池セルの開発”, 坂本良太、米田丈, 448, エヌ・ティー・エス, (2020), ISBN: 978-4-8604-3657-5
・「Hybrid Metal-Organic Framework and Covalent Organic Framework Polymers」, Bo Wang (Ed.)
“Polymers in Metal-Organic Frameworks: Synthesis, Recognition, and Hybrid Materials”, B. L. Ouay, T. Kitao, N. Hosono, T. Uemura, RSC, (2020), ISBN: 978-183-91-6153-7
・「Make Life Visible」, Y. Toyama, A. Miyawaki, M. Nakamura, M. Jinzaki (Eds).
“Molecular dynamics revealed by single-molecule FRET measurement”, T. Shima, *S. Uemura, Springer Nature Publishing, , 37-65 (2019), ISBN: 978-981-48-0001-3
・「グラフェンから広がる二次元物質の新技術と応用」, 吾郷浩樹, 齋藤理一郎, “分子性ナノシートの精密合成およびその物性評価”, 坂本良太, 米田 丈, 479, エヌ・ティー・エス, (2019), ISBN: 978-4-8604-3663-6
・「Handbook of Dynein (Second Edition)」, Keiko Hirose (Ed.),
"Structural and Functional Analysis of Dynein Motor Domain"
Tomohiro Shima* and Takahide Kon, Jenny Stanford Publishing, (2019) 37-65, ISBN: 9789814800013